Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SNRPEP9-201ENST00000436794 238 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 FABP5P15-201ENST00000453566 214 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.37□□□□□ -1.87
ABCD3P28288 AC004801.2-202ENST00000463559 283 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 RPS3AP17-201ENST00000472594 777 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC023194.1-201ENST00000493084 308 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC105252.1-201ENST00000503089 286 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC026427.2-201ENST00000506228 536 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 RNU1-128P-201ENST00000516704 160 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 RNU6-445P-201ENST00000516949 107 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ABCD3P28288 TRMT10BP1-201ENST00000519377 943 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AP003392.2-201ENST00000527269 208 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCD3P28288 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCD3P28288 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCD3P28288 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCD3P28288 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.37□□□□□ -1.87
ABCD3P28288 Z99129.1-201ENST00000612510 255 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AP003122.6-201ENST00000623831 495 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC068880.5-201ENST00000624331 290 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 AC068137.4-201ENST00000638485 296 ntBASIC3.37□□□□□ -1.87
ABCD3P28288 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.37□□□□□ -1.87
ABCD3P28288 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ABCD3P28288 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
ABCD3P28288 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
ABCD3P28288 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.37□□□□□ -1.87
ABCD3P28288 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
ABCD3P28288 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.36□□□□□ -1.87
ABCD3P28288 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
ABCD3P28288 RNU6-288P-201ENST00000363690 104 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 RNU6-512P-201ENST00000364438 103 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 SNORA62.3-201ENST00000365110 153 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 SNORA5A-201ENST00000384111 134 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 RNU6-198P-201ENST00000384258 104 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 MIR888-201ENST00000401186 77 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.36□□□□□ -1.87
ABCD3P28288 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCD3P28288 AC099548.1-201ENST00000421443 426 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.36□□□□□ -1.87
ABCD3P28288 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 RPL23AP30-201ENST00000432419 501 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 HSPD1P21-201ENST00000436541 245 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 RPS24P13-201ENST00000442520 397 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC132479.1-201ENST00000449160 144 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC093899.1-201ENST00000457984 376 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 snoU13.28-201ENST00000459235 104 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC034236.1-201ENST00000469891 373 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC116562.3-201ENST00000506136 177 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
ABCD3P28288 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCD3P28288 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCD3P28288 DUXAP2-201ENST00000519198 589 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC068587.5-201ENST00000528506 175 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 MIR3186-201ENST00000577404 85 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 MIR5047-201ENST00000579212 100 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 MTND1P15-201ENST00000579262 949 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCD3P28288 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCD3P28288 AL592295.2-201ENST00000612578 206 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AL359547.2-201ENST00000615810 418 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.36□□□□□ -1.87
ABCD3P28288 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCD3P28288 AC012442.3-202ENST00000636742 206 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 LRRC77P-213ENST00000637727 880 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ABCD3P28288 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
ABCD3P28288 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
ABCD3P28288 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ABCD3P28288 AC103988.1-201ENST00000566382 2177 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RIOK3P1-201ENST00000418778 1528 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ABCD3P28288 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.35□□□□□ -1.87
ABCD3P28288 MTND5P17-201ENST00000418405 1603 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AC092447.7-201ENST00000422212 1621 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
ABCD3P28288 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ABCD3P28288 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ABCD3P28288 RNU6-179P-201ENST00000363350 107 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 Y_RNA.296-201ENST00000364930 108 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RNU6-282P-201ENST00000365357 103 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AL359837.1-201ENST00000381357 287 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RNU2-66P-201ENST00000410650 161 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RNU2-68P-201ENST00000410878 191 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 RNU6-387P-201ENST00000411331 105 ntBASIC3.35□□□□□ -1.87
ABCD3P28288 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.35□□□□□ -1.87
ABCD3P28288 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.35□□□□□ -1.87
ABCD3P28288 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms