Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU2-8P-201ENST00000410727 190 ntBASIC3.6□□□□□ -1.83
MMP3P08254 MTND1P21-201ENST00000412991 285 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.6□□□□□ -1.83
MMP3P08254 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.6□□□□□ -1.83
MMP3P08254 AC073464.1-201ENST00000429823 534 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AL158071.1-201ENST00000430315 461 ntBASIC3.6□□□□□ -1.83
MMP3P08254 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.6□□□□□ -1.83
MMP3P08254 AL596276.1-201ENST00000434465 418 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC002486.1-201ENST00000435098 391 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AL138799.3-201ENST00000438968 350 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.6□□□□□ -1.83
MMP3P08254 HMGB3P30-201ENST00000457863 606 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC013267.1-201ENST00000458227 267 ntBASIC3.6□□□□□ -1.83
MMP3P08254 RNU7-170P-201ENST00000459303 61 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC135721.1-201ENST00000497954 479 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.6□□□□□ -1.83
MMP3P08254 AP000857.1-201ENST00000532151 543 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AK6P1-201ENST00000540219 478 ntBASIC3.6□□□□□ -1.83
MMP3P08254 SUB1P2-201ENST00000556401 297 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AL133153.1-201ENST00000557756 303 ntBASIC3.6□□□□□ -1.83
MMP3P08254 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.6□□□□□ -1.83
MMP3P08254 MIR4801-201ENST00000582704 82 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.6□□□□□ -1.83
MMP3P08254 AC006504.3-201ENST00000586818 523 ntBASIC3.6□□□□□ -1.83
MMP3P08254 KC877982.1-201ENST00000602313 470 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AL138713.1-201ENST00000624026 2130 ntBASIC3.6□□□□□ -1.83
MMP3P08254 AC244205.2-202ENST00000635781 342 ntBASIC3.6□□□□□ -1.83
MMP3P08254 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
MMP3P08254 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
MMP3P08254 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MMP3P08254 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MMP3P08254 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MMP3P08254 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.6□□□□□ -1.83
MMP3P08254 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
MMP3P08254 AC118273.1-201ENST00000525324 3006 ntBASIC3.6□□□□□ -1.83
MMP3P08254 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MMP3P08254 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.59□□□□□ -1.83
MMP3P08254 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
MMP3P08254 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MMP3P08254 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
MMP3P08254 Y_RNA.1-201ENST00000352915 104 ntBASIC3.59□□□□□ -1.83
MMP3P08254 RNU1-140P-201ENST00000365040 165 ntBASIC3.59□□□□□ -1.83
MMP3P08254 RNU6-432P-201ENST00000384196 109 ntBASIC3.59□□□□□ -1.83
MMP3P08254 SNORA7.4-201ENST00000384249 137 ntBASIC3.59□□□□□ -1.83
MMP3P08254 RNU6-456P-201ENST00000384493 107 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC068050.1-201ENST00000394891 380 ntBASIC3.59□□□□□ -1.83
MMP3P08254 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.59□□□□□ -1.83
MMP3P08254 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
MMP3P08254 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.59□□□□□ -1.83
MMP3P08254 RPL23AP82-202ENST00000427528 469 ntBASIC3.59□□□□□ -1.83
MMP3P08254 PSPHP1-201ENST00000450062 261 ntBASIC3.59□□□□□ -1.83
MMP3P08254 RPL23AP62-201ENST00000463396 453 ntBASIC3.59□□□□□ -1.83
MMP3P08254 CENPBD1P1-201ENST00000464061 469 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.59□□□□□ -1.83
MMP3P08254 AC007182.2-201ENST00000489251 402 ntBASIC3.59□□□□□ -1.83
MMP3P08254 HMGB1P29-201ENST00000505659 499 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.59□□□□□ -1.83
MMP3P08254 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.59□□□□□ -1.83
MMP3P08254 Y_RNA.704-201ENST00000516851 102 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.59□□□□□ -1.83
MMP3P08254 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.59□□□□□ -1.83
MMP3P08254 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.59□□□□□ -1.83
MMP3P08254 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.59□□□□□ -1.83
MMP3P08254 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.59□□□□□ -1.83
MMP3P08254 AC006254.3-201ENST00000603353 884 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC004908.2-201ENST00000609090 574 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC090517.2-201ENST00000614966 680 ntBASIC3.59□□□□□ -1.83
MMP3P08254 uc_338.12-201ENST00000616344 181 ntBASIC3.59□□□□□ -1.83
MMP3P08254 ATP5A1P2-202ENST00000616464 443 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AL359880.1-201ENST00000621879 266 ntBASIC3.59□□□□□ -1.83
MMP3P08254 AC138649.5-201ENST00000637456 137 ntBASIC3.59□□□□□ -1.83
MMP3P08254 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
MMP3P08254 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
MMP3P08254 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
MMP3P08254 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MMP3P08254 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MMP3P08254 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MMP3P08254 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MMP3P08254 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MMP3P08254 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.58□□□□□ -1.84
MMP3P08254 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
MMP3P08254 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MMP3P08254 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MMP3P08254 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.58□□□□□ -1.84
MMP3P08254 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.58□□□□□ -1.84
MMP3P08254 RNU5E-8P-201ENST00000363502 116 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RNU6-1090P-201ENST00000364065 94 ntBASIC3.58□□□□□ -1.84
MMP3P08254 Y_RNA.248-201ENST00000364501 109 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RNU6-169P-201ENST00000365336 107 ntBASIC3.58□□□□□ -1.84
MMP3P08254 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MMP3P08254 RNU6-637P-201ENST00000384050 107 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RNU6-39P-201ENST00000384344 107 ntBASIC3.58□□□□□ -1.84
MMP3P08254 SNORA44-201ENST00000384584 132 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RNU6-328P-201ENST00000390887 106 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AL590002.1-201ENST00000406554 418 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RPL5P18-201ENST00000406671 891 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RPS3AP24-201ENST00000407896 734 ntBASIC3.58□□□□□ -1.84
MMP3P08254 BEND7P1-201ENST00000422058 457 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC244098.2-201ENST00000422068 99 ntBASIC3.58□□□□□ -1.84
MMP3P08254 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms