Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.3□□□□□ -2.04
ERCC1P07992 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.3□□□□□ -2.04
ERCC1P07992 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.3□□□□□ -2.04
ERCC1P07992 OR5BN1P-201ENST00000532955 829 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ERCC1P07992 CYCSP39-201ENST00000565821 309 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.3□□□□□ -2.04
ERCC1P07992 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.3□□□□□ -2.04
ERCC1P07992 DUXAP3-201ENST00000603616 594 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 AL357094.1-201ENST00000603845 844 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 AL160237.3-201ENST00000604114 1013 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 OR10AB1P-201ENST00000609613 938 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.3□□□□□ -2.04
ERCC1P07992 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ERCC1P07992 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ERCC1P07992 AC092447.10-201ENST00000620607 1652 ntBASIC2.3□□□□□ -2.04
ERCC1P07992 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ERCC1P07992 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
ERCC1P07992 AC080128.1-201ENST00000474389 1917 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 MTND4P27-201ENST00000450813 1354 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 RNU6-432P-201ENST00000384196 109 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 MIR34A-201ENST00000385130 110 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 RNU6-1328P-201ENST00000410938 106 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.29□□□□□ -2.04
ERCC1P07992 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.29□□□□□ -2.04
ERCC1P07992 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.29□□□□□ -2.04
ERCC1P07992 RPL23AP76-201ENST00000441860 458 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.29□□□□□ -2.04
ERCC1P07992 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.29□□□□□ -2.04
ERCC1P07992 AP000936.2-201ENST00000447151 681 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.29□□□□□ -2.04
ERCC1P07992 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.29□□□□□ -2.04
ERCC1P07992 AL109933.2-201ENST00000452651 260 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC098591.2-201ENST00000510152 315 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.29□□□□□ -2.04
ERCC1P07992 AC008837.2-201ENST00000513076 418 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC114781.4-201ENST00000513707 639 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.29□□□□□ -2.04
ERCC1P07992 RN7SKP132-201ENST00000516001 208 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 HMGB1P41-201ENST00000520234 440 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC021451.1-201ENST00000523498 1129 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.29□□□□□ -2.04
ERCC1P07992 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.29□□□□□ -2.04
ERCC1P07992 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.29□□□□□ -2.04
ERCC1P07992 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.29□□□□□ -2.04
ERCC1P07992 BNIP3P26-201ENST00000600827 554 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 AL449363.1-201ENST00000617815 186 ntBASIC2.29□□□□□ -2.04
ERCC1P07992 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
ERCC1P07992 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ERCC1P07992 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 MIR6073-201ENST00000352083 89 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 SNORA38-201ENST00000363946 132 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.28□□□□□ -2.04
ERCC1P07992 AL139413.1-201ENST00000421309 217 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 BPY2DP-201ENST00000422208 265 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 HMGB1P9-201ENST00000429856 646 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 MED14P1-201ENST00000430517 648 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.28□□□□□ -2.04
ERCC1P07992 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 EEF1B2P7-201ENST00000451177 676 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ERCC1P07992 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 AC073901.1-201ENST00000462471 408 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AC133134.1-201ENST00000466800 359 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.28□□□□□ -2.04
ERCC1P07992 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
ERCC1P07992 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 AC024589.1-201ENST00000512207 263 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.28□□□□□ -2.04
ERCC1P07992 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 AC100870.1-201ENST00000522035 505 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
ERCC1P07992 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.28□□□□□ -2.04
ERCC1P07992 AC123904.3-201ENST00000547218 814 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AC007954.1-201ENST00000554198 494 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.28□□□□□ -2.04
ERCC1P07992 AF038458.1-201ENST00000588406 262 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AP000403.1-201ENST00000603349 851 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
ERCC1P07992 AC005858.4-201ENST00000623191 700 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
ERCC1P07992 IGHVIII-44-202ENST00000636235 289 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 AC099063.3-201ENST00000642066 185 ntBASIC2.28□□□□□ -2.04
ERCC1P07992 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.27□□□□□ -2.05
ERCC1P07992 AC004520.1-201ENST00000608362 1413 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ERCC1P07992 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
ERCC1P07992 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
ERCC1P07992 SNORD62.1-201ENST00000362541 86 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 RNU6-1083P-201ENST00000384022 107 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 AL445529.1-201ENST00000398713 389 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 AL139039.1-201ENST00000401900 692 ntBASIC2.27□□□□□ -2.05
ERCC1P07992 RPS4XP7-201ENST00000406274 780 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms