Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MTND4LP10-201ENST00000435146 291 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 MTCYBP45-201ENST00000435243 565 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 RPS25P9-201ENST00000435591 252 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 RPL7P36-201ENST00000444633 681 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 SNORD11.1-201ENST00000459482 85 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC073901.1-201ENST00000462471 408 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC090453.1-201ENST00000495560 436 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 HSPE1P23-201ENST00000509838 286 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 RN7SKP265-201ENST00000516448 223 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CTDNEP1O95476 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC008739.2-201ENST00000597006 317 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 VN1R78P-201ENST00000597393 564 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC079395.3-201ENST00000615161 484 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AL590808.1-201ENST00000618696 141 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AP000484.1-201ENST00000620067 1252 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 YWHAEP7-203ENST00000622054 312 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC004009.2-201ENST00000623016 728 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
CTDNEP1O95476 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CTDNEP1O95476 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
CTDNEP1O95476 Z82195.2-201ENST00000612348 18351 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC135776.4-201ENST00000624300 1904 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 SNORD51-201ENST00000384320 80 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 RNU6-1122P-201ENST00000384449 107 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 RSL24D1P4-201ENST00000400938 484 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 RNU2-15P-201ENST00000410692 191 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AL008987.1-201ENST00000415528 237 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 TIMM9P2-201ENST00000419324 266 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AL590233.1-201ENST00000430017 456 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC004866.2-201ENST00000438285 481 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 Z73417.1-201ENST00000447373 778 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 EEF1B2P7-201ENST00000451177 676 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 OFD1P3Y-201ENST00000453312 783 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 RNU7-136P-201ENST00000458819 69 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 MTND1P16-201ENST00000465177 898 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 RPL9P6-201ENST00000492764 598 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC010587.2-201ENST00000511727 448 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC109445.1-201ENST00000512356 383 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 DEFB131D-201ENST00000526803 184 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 CYCSP2-201ENST00000558168 301 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AL512347.1-201ENST00000566420 503 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 MIR4446-201ENST00000578505 67 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 MIR5089-201ENST00000580047 84 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 SNRPGP19-201ENST00000603826 189 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC010738.1-201ENST00000604970 987 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC006270.3-201ENST00000605967 1036 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 AC068787.1-201ENST00000623908 691 ntBASIC2.39□□□□□ -2.03
CTDNEP1O95476 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.39□□□□□ -2.03
CTDNEP1O95476 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CTDNEP1O95476 AP006437.1-201ENST00000641440 3685 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 AP000568.1-201ENST00000282964 442 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CTDNEP1O95476 SNORD113-6-201ENST00000363345 75 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CTDNEP1O95476 RNU6-157P-201ENST00000383957 107 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 RNU6-952P-201ENST00000391164 108 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CTDNEP1O95476 MIR1284-201ENST00000408337 120 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 MTND1P23-201ENST00000416931 372 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 RPL22P18-201ENST00000417197 377 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms