Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RPL31P3-201ENST00000458430 332 ntBASIC3.52□□□□□ -1.85
RTN3O95197 SNORA59A-201ENST00000459326 152 ntBASIC3.52□□□□□ -1.85
RTN3O95197 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN3O95197 RBM43P1-201ENST00000476891 1081 ntBASIC3.52□□□□□ -1.85
RTN3O95197 KC877373.1-201ENST00000479066 408 ntBASIC3.52□□□□□ -1.85
RTN3O95197 MTND1P3-201ENST00000484956 952 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.52□□□□□ -1.85
RTN3O95197 AC010587.1-201ENST00000505809 469 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 AC026427.2-201ENST00000506228 536 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AC091965.2-201ENST00000512324 613 ntBASIC3.52□□□□□ -1.85
RTN3O95197 RNU2-10P-201ENST00000516375 211 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AC107934.2-201ENST00000518653 310 ntBASIC3.52□□□□□ -1.85
RTN3O95197 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.52□□□□□ -1.85
RTN3O95197 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTN3O95197 HIGD1AP1-201ENST00000550979 275 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 AC103710.2-201ENST00000609912 942 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.52□□□□□ -1.85
RTN3O95197 AC005858.4-201ENST00000623191 700 ntBASIC3.52□□□□□ -1.85
RTN3O95197 CU459211.1-201ENST00000635667 749 ntBASIC3.52□□□□□ -1.85
RTN3O95197 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.52□□□□□ -1.85
RTN3O95197 AC110774.1-201ENST00000623567 2018 ntBASIC3.52□□□□□ -1.85
RTN3O95197 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.51□□□□□ -1.85
RTN3O95197 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTN3O95197 GNG5P1-201ENST00000255500 204 ntBASIC3.51□□□□□ -1.85
RTN3O95197 Y_RNA.77-201ENST00000362962 107 ntBASIC3.51□□□□□ -1.85
RTN3O95197 NDUFS5P1-201ENST00000405668 289 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC245291.1-201ENST00000419501 328 ntBASIC3.51□□□□□ -1.85
RTN3O95197 SEPT2P1-201ENST00000419651 180 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC092047.1-201ENST00000424997 240 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 ST13P20-201ENST00000447996 1065 ntBASIC3.51□□□□□ -1.85
RTN3O95197 SNORD42A-201ENST00000459584 64 ntBASIC3.51□□□□□ -1.85
RTN3O95197 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.51□□□□□ -1.85
RTN3O95197 AC068724.1-201ENST00000487100 792 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC080014.1-201ENST00000496877 1201 ntBASIC3.51□□□□□ -1.85
RTN3O95197 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 MTND4LP22-201ENST00000508209 276 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 RNA5SP337-201ENST00000517007 109 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 AP002453.2-201ENST00000533503 320 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 AC015917.1-201ENST00000579654 510 ntBASIC3.51□□□□□ -1.85
RTN3O95197 MIR3682-201ENST00000581338 84 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.6-201ENST00000603753 252 ntBASIC3.51□□□□□ -1.85
RTN3O95197 DPPA3P3-201ENST00000603842 430 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.11-201ENST00000604059 253 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AL161729.4-201ENST00000604650 476 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC008162.1-201ENST00000604718 254 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.1-201ENST00000604752 252 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.5-201ENST00000605253 252 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.12-201ENST00000605291 253 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.8-201ENST00000605353 252 ntBASIC3.51□□□□□ -1.85
RTN3O95197 AC073657.2-201ENST00000605661 303 ntBASIC3.51□□□□□ -1.85
RTN3O95197 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.51□□□□□ -1.85
RTN3O95197 AL670379.7-201ENST00000605823 252 ntBASIC3.51□□□□□ -1.85
RTN3O95197 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.51□□□□□ -1.85
RTN3O95197 AC131902.3-201ENST00000611767 581 ntBASIC3.51□□□□□ -1.85
RTN3O95197 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RTN3O95197 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.51□□□□□ -1.85
RTN3O95197 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.51□□□□□ -1.85
RTN3O95197 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTN3O95197 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.51□□□□□ -1.85
RTN3O95197 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.51□□□□□ -1.85
RTN3O95197 AC233263.6-201ENST00000631132 1963 ntBASIC3.51□□□□□ -1.85
RTN3O95197 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTN3O95197 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RTN3O95197 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RTN3O95197 RNU4-1-201ENST00000363925 141 ntBASIC3.5□□□□□ -1.85
RTN3O95197 SNORA38.1-201ENST00000364172 131 ntBASIC3.5□□□□□ -1.85
RTN3O95197 SNORD116-9-201ENST00000384000 95 ntBASIC3.5□□□□□ -1.85
RTN3O95197 SNORD116-3-201ENST00000384287 95 ntBASIC3.5□□□□□ -1.85
RTN3O95197 SNORD116-7-201ENST00000384404 95 ntBASIC3.5□□□□□ -1.85
RTN3O95197 SNORD116-5-201ENST00000384462 95 ntBASIC3.5□□□□□ -1.85
RTN3O95197 RNU6-1035P-201ENST00000384477 107 ntBASIC3.5□□□□□ -1.85
RTN3O95197 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RTN3O95197 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.5□□□□□ -1.85
RTN3O95197 ZNF90P2-204ENST00000419323 1075 ntBASIC3.5□□□□□ -1.85
RTN3O95197 RAC1P6-201ENST00000423911 575 ntBASIC3.5□□□□□ -1.85
RTN3O95197 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.5□□□□□ -1.85
RTN3O95197 AC006028.1-201ENST00000438379 402 ntBASIC3.5□□□□□ -1.85
RTN3O95197 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 MTND2P22-201ENST00000444325 1033 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.5□□□□□ -1.85
RTN3O95197 BX510359.1-201ENST00000456973 237 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC087588.1-201ENST00000462203 316 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.5□□□□□ -1.85
RTN3O95197 RN7SL432P-201ENST00000484057 298 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AL160314.1-201ENST00000490836 438 ntBASIC3.5□□□□□ -1.85
RTN3O95197 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.5□□□□□ -1.85
RTN3O95197 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.5□□□□□ -1.85
RTN3O95197 AP000867.2-201ENST00000532468 320 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms