Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SNORA32.2-201ENST00000384049 122 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RNU6-606P-201ENST00000384721 111 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 MIR19A-201ENST00000384878 82 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RN7SKP32-201ENST00000410167 303 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RN7SKP159-201ENST00000410657 292 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RNU2-15P-201ENST00000410692 191 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.17□□□□□ -1.74
CDKL5O76039 MTCYBP8-201ENST00000422855 651 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL5O76039 AC002075.2-201ENST00000425207 252 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 SRIP2-201ENST00000428470 166 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 UBE2V1P13-201ENST00000436983 439 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC093156.1-201ENST00000440382 670 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 RPS29P31-201ENST00000446147 164 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC233279.1-201ENST00000455300 423 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.17□□□□□ -1.74
CDKL5O76039 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL5O76039 SNORD105B-201ENST00000458770 79 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC006512.1-201ENST00000468816 291 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 AL163973.1-201ENST00000484753 577 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 RPL38P4-201ENST00000502376 214 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC026427.2-201ENST00000506228 536 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC117522.3-201ENST00000507974 584 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL5O76039 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL5O76039 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL5O76039 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 SETP2-201ENST00000553886 926 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL5O76039 MIR4738-201ENST00000579134 87 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 AC022432.1-201ENST00000595739 310 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AL121992.2-201ENST00000606262 256 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL5O76039 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 TPTEP1-208ENST00000636884 213 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 MIR1302-1-201ENST00000637932 143 ntBASIC4.17□□□□□ -1.74
CDKL5O76039 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDKL5O76039 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.17□□□□□ -1.74
CDKL5O76039 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CDKL5O76039 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDKL5O76039 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL5O76039 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL5O76039 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL5O76039 Y_RNA.67-201ENST00000362870 100 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 SNORA63-201ENST00000363450 132 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 RNA5SP51-201ENST00000364750 119 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CDKL5O76039 RNU6-1227P-201ENST00000383981 107 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 MIR1302-11-201ENST00000408051 138 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 MIR1302-9-201ENST00000408365 138 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 MIR1302-10-201ENST00000408734 138 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.16□□□□□ -1.74
CDKL5O76039 OR4K11P-201ENST00000431829 904 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 RPS20P5-201ENST00000434808 360 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.16□□□□□ -1.74
CDKL5O76039 RAC1P7-201ENST00000445367 377 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 DDX3P2-201ENST00000446138 111 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC073415.1-201ENST00000449240 153 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AL353691.1-201ENST00000451332 387 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 RN7SL594P-201ENST00000470590 287 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL5O76039 TMEM248P1-201ENST00000510579 951 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 SNORD27.1-201ENST00000516319 72 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC087241.2-201ENST00000535801 324 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.16□□□□□ -1.74
CDKL5O76039 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.16□□□□□ -1.74
CDKL5O76039 SCOCP1-201ENST00000554676 349 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.16□□□□□ -1.74
CDKL5O76039 OR4K8P-201ENST00000578842 1048 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.16□□□□□ -1.74
CDKL5O76039 AP001029.3-201ENST00000588063 596 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC021646.1-201ENST00000605469 484 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC113194.1-201ENST00000606037 500 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 MIR1302-2-201ENST00000607096 138 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC103710.2-201ENST00000609912 942 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 AC245517.5-201ENST00000611529 162 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 uc_338.5-201ENST00000611839 155 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL5O76039 SAGE4P-201ENST00000442271 3381 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDKL5O76039 AL161912.2-201ENST00000565707 3007 ntBASIC4.16□□□□□ -1.74
CDKL5O76039 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDKL5O76039 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CDKL5O76039 AC073073.2-201ENST00000609827 2578 ntBASIC4.15□□□□□ -1.74
CDKL5O76039 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDKL5O76039 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CDKL5O76039 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CDKL5O76039 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDKL5O76039 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDKL5O76039 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CDKL5O76039 MIR124-3-201ENST00000384866 87 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AL445189.1-201ENST00000405722 338 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 RPS15AP40-201ENST00000419621 391 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AL035423.1-201ENST00000420331 213 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AF228730.4-201ENST00000421457 183 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms