Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC093155.1-201ENST00000440164 826 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.74□□□□□ -2.13
SSNA1O43805 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.74□□□□□ -2.13
SSNA1O43805 AL118520.1-201ENST00000450770 291 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 AC244505.3-201ENST00000454598 187 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 AC103987.1-201ENST00000473394 348 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SSNA1O43805 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.74□□□□□ -2.13
SSNA1O43805 snoZ278.1-201ENST00000517059 112 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.74□□□□□ -2.13
SSNA1O43805 COX6CP8-201ENST00000522620 226 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 MTATP6P25-201ENST00000574491 261 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 MIR4765-201ENST00000585007 77 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.74□□□□□ -2.13
SSNA1O43805 AL357094.1-201ENST00000603845 844 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 AC068276.1-201ENST00000605793 379 ntBASIC1.74□□□□□ -2.13
SSNA1O43805 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.74□□□□□ -2.13
SSNA1O43805 AL138713.1-201ENST00000624026 2130 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.73□□□□□ -2.13
SSNA1O43805 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SSNA1O43805 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SSNA1O43805 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 RNA5SP68-201ENST00000363885 119 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SSNA1O43805 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SSNA1O43805 NDUFS5P4-201ENST00000412983 318 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 Z98742.2-201ENST00000431564 187 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 GTF2IP7-202ENST00000436677 309 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 FABP5P14-201ENST00000437273 393 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC000041.1-201ENST00000439655 175 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 USP9YP8-201ENST00000441913 500 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.73□□□□□ -2.13
SSNA1O43805 RPL21P134-201ENST00000453468 483 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.73□□□□□ -2.13
SSNA1O43805 AC107032.1-201ENST00000485945 480 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SSNA1O43805 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.73□□□□□ -2.13
SSNA1O43805 RN7SKP31-201ENST00000516354 278 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.73□□□□□ -2.13
SSNA1O43805 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
SSNA1O43805 AC012468.1-201ENST00000604888 430 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC239803.2-201ENST00000610161 430 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AL627230.6-201ENST00000611129 280 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC084757.4-201ENST00000616350 526 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 U4atac.1-201ENST00000618345 95 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC253576.2-201ENST00000618815 580 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 AC244517.12-201ENST00000623581 663 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 MTND5P30-201ENST00000452896 1731 ntBASIC1.73□□□□□ -2.13
SSNA1O43805 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.73□□□□□ -2.13
SSNA1O43805 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SSNA1O43805 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.72□□□□□ -2.13
SSNA1O43805 RNU6-216P-201ENST00000363282 104 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 MIR34A-201ENST00000385130 110 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.72□□□□□ -2.13
SSNA1O43805 RNU2-52P-201ENST00000410680 190 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 RPL36AP36-201ENST00000418616 301 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.72□□□□□ -2.13
SSNA1O43805 MTCO2P5-201ENST00000422621 426 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 XKRYP1-201ENST00000423438 492 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 HMGN2P19-201ENST00000425149 265 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 XKRYP2-201ENST00000432915 492 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 SNRPEP9-201ENST00000436794 238 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 USP9YP22-201ENST00000438971 294 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.72□□□□□ -2.13
SSNA1O43805 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SSNA1O43805 AC008379.1-201ENST00000463655 464 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AC026801.1-201ENST00000497178 464 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.72□□□□□ -2.13
SSNA1O43805 AC008526.1-201ENST00000509149 338 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 RNU2-44P-201ENST00000516795 194 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.72□□□□□ -2.13
SSNA1O43805 HMGN1P28-201ENST00000521340 364 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.72□□□□□ -2.13
SSNA1O43805 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.72□□□□□ -2.13
SSNA1O43805 MIR4529-201ENST00000578110 78 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 MIR3200-201ENST00000580767 85 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AC093732.2-201ENST00000607950 274 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AC068831.8-201ENST00000620171 435 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 AP003400.5-201ENST00000624827 617 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 MIR3199-2-201ENST00000636243 86 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 U2.21-201ENST00000637295 81 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
SSNA1O43805 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
SSNA1O43805 AL354685.2-201ENST00000448218 1447 ntBASIC1.72□□□□□ -2.13
SSNA1O43805 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.72□□□□□ -2.13
SSNA1O43805 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.71□□□□□ -2.13
SSNA1O43805 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.71□□□□□ -2.14
SSNA1O43805 RNU6-778P-201ENST00000363269 103 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 RNU6-1078P-201ENST00000364522 103 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.71□□□□□ -2.14
SSNA1O43805 RNU6-637P-201ENST00000384050 107 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 MCTS2P-201ENST00000394552 546 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 AL031679.1-201ENST00000400616 525 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 MIR937-201ENST00000401271 86 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.71□□□□□ -2.14
SSNA1O43805 EDDM3CP-201ENST00000415977 425 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 AC096920.1-201ENST00000423991 241 ntBASIC1.71□□□□□ -2.14
SSNA1O43805 BX119904.4-201ENST00000424402 301 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms