Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD1O14646 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD1O14646 AC108706.1-201ENST00000611053 297 ntBASIC1.85□□□□□ -2.11
CHD1O14646 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CHD1O14646 AL138880.2-201ENST00000616214 239 ntBASIC1.85□□□□□ -2.11
CHD1O14646 AC010809.3-201ENST00000621310 641 ntBASIC1.85□□□□□ -2.11
CHD1O14646 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CHD1O14646 MFSD8-213ENST00000641134 1327 ntBASIC1.84□□□□□ -2.11
CHD1O14646 RNU6-629P-201ENST00000384061 103 ntBASIC1.84□□□□□ -2.11
CHD1O14646 AC007098.1-201ENST00000420122 367 ntBASIC1.84□□□□□ -2.11
CHD1O14646 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.84□□□□□ -2.11
CHD1O14646 AC096772.1-201ENST00000609146 564 ntBASIC1.84□□□□□ -2.11
CHD1O14646 AL442644.1-201ENST00000454390 3105 ntBASIC1.84□□□□□ -2.12
CHD1O14646 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.83□□□□□ -2.12
CHD1O14646 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC233728.2-201ENST00000425348 757 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AL591212.2-201ENST00000433923 257 ntBASIC1.83□□□□□ -2.12
CHD1O14646 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.83□□□□□ -2.12
CHD1O14646 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD1O14646 AC022690.1-201ENST00000526681 550 ntBASIC1.83□□□□□ -2.12
CHD1O14646 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.83□□□□□ -2.12
CHD1O14646 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CHD1O14646 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CHD1O14646 AP003117.1-201ENST00000602771 554 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
CHD1O14646 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.83□□□□□ -2.12
CHD1O14646 SNORD23.1-201ENST00000408212 104 ntBASIC1.83□□□□□ -2.12
CHD1O14646 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.83□□□□□ -2.12
CHD1O14646 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.83□□□□□ -2.12
CHD1O14646 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CHD1O14646 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.83□□□□□ -2.12
CHD1O14646 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD1O14646 HMGB3P17-201ENST00000504195 649 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC025768.1-201ENST00000510057 267 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD1O14646 AC118942.1-201ENST00000529674 1035 ntBASIC1.83□□□□□ -2.12
CHD1O14646 SETP7-201ENST00000552169 453 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC090897.2-201ENST00000581715 130 ntBASIC1.83□□□□□ -2.12
CHD1O14646 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.83□□□□□ -2.12
CHD1O14646 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.82□□□□□ -2.12
CHD1O14646 RNU6-461P-201ENST00000364195 107 ntBASIC1.82□□□□□ -2.12
CHD1O14646 RNU6-1072P-201ENST00000384703 107 ntBASIC1.82□□□□□ -2.12
CHD1O14646 RNU6-443P-201ENST00000384780 107 ntBASIC1.82□□□□□ -2.12
CHD1O14646 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CHD1O14646 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
CHD1O14646 AL691517.1-201ENST00000440833 1235 ntBASIC1.82□□□□□ -2.12
CHD1O14646 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CHD1O14646 SNORA31.16-201ENST00000516773 139 ntBASIC1.82□□□□□ -2.12
CHD1O14646 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CHD1O14646 AC135178.6-201ENST00000605314 398 ntBASIC1.82□□□□□ -2.12
CHD1O14646 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.82□□□□□ -2.12
CHD1O14646 ZNF519P1-201ENST00000449011 1626 ntBASIC1.82□□□□□ -2.12
CHD1O14646 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CHD1O14646 AC130650.2-201ENST00000618736 2403 ntBASIC1.81□□□□□ -2.12
CHD1O14646 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CHD1O14646 Y_RNA.68-201ENST00000362881 102 ntBASIC1.81□□□□□ -2.12
CHD1O14646 RNU1-78P-201ENST00000391248 165 ntBASIC1.81□□□□□ -2.12
CHD1O14646 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.81□□□□□ -2.12
CHD1O14646 AL136380.1-201ENST00000447970 162 ntBASIC1.81□□□□□ -2.12
CHD1O14646 AL031183.1-201ENST00000457667 207 ntBASIC1.81□□□□□ -2.12
CHD1O14646 RPS23P3-201ENST00000470993 430 ntBASIC1.81□□□□□ -2.12
CHD1O14646 RPL7P18-201ENST00000478965 734 ntBASIC1.81□□□□□ -2.12
CHD1O14646 AC093801.2-201ENST00000503966 1050 ntBASIC1.81□□□□□ -2.12
CHD1O14646 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.81□□□□□ -2.12
CHD1O14646 RN7SKP277-201ENST00000516895 283 ntBASIC1.81□□□□□ -2.12
CHD1O14646 RNU6-1073P-201ENST00000517182 106 ntBASIC1.81□□□□□ -2.12
CHD1O14646 AC092451.2-201ENST00000538746 658 ntBASIC1.81□□□□□ -2.12
CHD1O14646 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.81□□□□□ -2.12
CHD1O14646 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.81□□□□□ -2.12
CHD1O14646 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CHD1O14646 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CHD1O14646 MIR193B-201ENST00000384907 83 ntBASIC1.8□□□□□ -2.12
CHD1O14646 SNORA46.1-201ENST00000391069 153 ntBASIC1.8□□□□□ -2.12
CHD1O14646 SNORA81-201ENST00000408493 178 ntBASIC1.8□□□□□ -2.12
CHD1O14646 AC093716.1-201ENST00000435923 377 ntBASIC1.8□□□□□ -2.12
CHD1O14646 RPS15AP34-201ENST00000487776 387 ntBASIC1.8□□□□□ -2.12
CHD1O14646 AC104685.1-201ENST00000502445 371 ntBASIC1.8□□□□□ -2.12
CHD1O14646 MTCYBP41-201ENST00000528913 1123 ntBASIC1.8□□□□□ -2.12
CHD1O14646 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.8□□□□□ -2.12
CHD1O14646 AC015849.6-201ENST00000605454 474 ntBASIC1.8□□□□□ -2.12
CHD1O14646 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.8□□□□□ -2.12
CHD1O14646 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.8□□□□□ -2.12
CHD1O14646 AC023347.2-201ENST00000433994 462 ntBASIC1.8□□□□□ -2.12
CHD1O14646 RNA5SP330-201ENST00000517096 96 ntBASIC1.8□□□□□ -2.12
CHD1O14646 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.8□□□□□ -2.12
CHD1O14646 MIR1273G-201ENST00000577677 100 ntBASIC1.8□□□□□ -2.12
CHD1O14646 AC106791.2-201ENST00000604680 391 ntBASIC1.8□□□□□ -2.12
CHD1O14646 AC211469.2-201ENST00000605461 205 ntBASIC1.8□□□□□ -2.12
CHD1O14646 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.8□□□□□ -2.12
CHD1O14646 AL391834.1-201ENST00000609609 560 ntBASIC1.8□□□□□ -2.12
CHD1O14646 Y_RNA.115-201ENST00000363272 98 ntBASIC1.79□□□□□ -2.12
CHD1O14646 RNU1-52P-201ENST00000384190 164 ntBASIC1.79□□□□□ -2.12
CHD1O14646 HNRNPDP2-201ENST00000406475 478 ntBASIC1.79□□□□□ -2.12
CHD1O14646 RNA5SP498-201ENST00000411342 120 ntBASIC1.79□□□□□ -2.12
CHD1O14646 PSPHP1-201ENST00000450062 261 ntBASIC1.79□□□□□ -2.12
CHD1O14646 RPL30P12-201ENST00000474666 353 ntBASIC1.79□□□□□ -2.12
CHD1O14646 HMGB1P38-201ENST00000490557 577 ntBASIC1.79□□□□□ -2.12
CHD1O14646 NDUFS5P6-201ENST00000529136 295 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms