Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 WASF1P1-201ENST00000447560 1131 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AC011753.1-201ENST00000451001 220 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1AO00322 AP1S2P1-201ENST00000457344 379 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 RBM43P1-201ENST00000476891 1081 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 LARP1BP2-201ENST00000486594 519 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK1AO00322 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1AO00322 AC138853.1-201ENST00000503549 823 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK1AO00322 COX6CP5-201ENST00000527162 228 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.04□□□□□ -2.08
UPK1AO00322 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AL132857.1-201ENST00000555180 708 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.04□□□□□ -2.08
UPK1AO00322 AL079343.1-201ENST00000572358 1771 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1AO00322 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.04□□□□□ -2.08
UPK1AO00322 AC068313.1-201ENST00000604028 1008 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AC112220.2-201ENST00000605513 533 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UPK1AO00322 AC079395.3-201ENST00000615161 484 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
UPK1AO00322 AL357080.1-201ENST00000617394 239 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AL603758.1-201ENST00000618654 241 ntBASIC2.04□□□□□ -2.08
UPK1AO00322 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.04□□□□□ -2.08
UPK1AO00322 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UPK1AO00322 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.04□□□□□ -2.08
UPK1AO00322 RNU5E-8P-201ENST00000363502 116 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
UPK1AO00322 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1AO00322 AC098614.2-201ENST00000426040 255 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1AO00322 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK1AO00322 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK1AO00322 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK1AO00322 AL118520.1-201ENST00000450770 291 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 RPL18AP17-201ENST00000455326 198 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 BX322784.1-201ENST00000455793 1077 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1AO00322 RNU7-136P-201ENST00000458819 69 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 RPS20P20-201ENST00000460498 340 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK1AO00322 RNU6-714P-201ENST00000516963 103 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.03□□□□□ -2.08
UPK1AO00322 AC025755.1-201ENST00000521306 278 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK1AO00322 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK1AO00322 GLYCAM1-201ENST00000546596 285 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 TRAV28-201ENST00000557548 323 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 AC104072.1-201ENST00000568817 668 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 LRRC37A5P-203ENST00000580181 585 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1AO00322 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.03□□□□□ -2.08
UPK1AO00322 OR1M4P-201ENST00000589199 287 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.03□□□□□ -2.08
UPK1AO00322 AC093838.1-201ENST00000613014 469 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 AC023158.2-201ENST00000614876 543 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 MIR6132-201ENST00000622083 109 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 OR1S1-201ENST00000624470 978 ntBASIC2.03□□□□□ -2.08
UPK1AO00322 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
UPK1AO00322 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
UPK1AO00322 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.03□□□□□ -2.08
UPK1AO00322 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1AO00322 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
UPK1AO00322 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
UPK1AO00322 RNU1-91P-201ENST00000364746 163 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 RNU1-73P-201ENST00000383971 164 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 RNU6-637P-201ENST00000384050 107 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 RNA5SP80-201ENST00000410475 111 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 Z75741.2-201ENST00000417272 1167 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1AO00322 AC005005.2-201ENST00000420779 380 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 GTF2IP20-201ENST00000431663 360 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 PIGFP3-201ENST00000441918 722 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1AO00322 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.02□□□□□ -2.09
UPK1AO00322 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1AO00322 SUMO2P5-201ENST00000506790 245 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1AO00322 AC113155.1-201ENST00000511141 769 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 SCARNA16.3-201ENST00000516595 184 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 HMGN1P28-201ENST00000521340 364 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.02□□□□□ -2.09
UPK1AO00322 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1AO00322 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.02□□□□□ -2.09
UPK1AO00322 OR6C7P-201ENST00000547875 934 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AC087465.1-201ENST00000560574 245 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AC090616.3-201ENST00000582184 217 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.02□□□□□ -2.09
UPK1AO00322 AL161729.4-201ENST00000604650 476 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AL121917.1-203ENST00000605534 577 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AC013476.2-201ENST00000614456 459 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 AL445264.1-201ENST00000621719 171 ntBASIC2.02□□□□□ -2.09
UPK1AO00322 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms