Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC022447.3-201ENST00000506865 495 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC006499.2-201ENST00000513470 337 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.2□□□□□ -2.06
DFFAO00273 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.2□□□□□ -2.06
DFFAO00273 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.2□□□□□ -2.06
DFFAO00273 RNU6-583P-201ENST00000516012 92 ntBASIC2.2□□□□□ -2.06
DFFAO00273 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
DFFAO00273 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.2□□□□□ -2.06
DFFAO00273 AC087465.1-201ENST00000560574 245 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC026464.5-201ENST00000562497 722 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.2□□□□□ -2.06
DFFAO00273 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.2□□□□□ -2.06
DFFAO00273 AL158211.2-201ENST00000607282 395 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.2□□□□□ -2.06
DFFAO00273 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.2□□□□□ -2.06
DFFAO00273 AC013562.2-201ENST00000611632 603 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AL357080.1-201ENST00000617394 239 ntBASIC2.2□□□□□ -2.06
DFFAO00273 AC093591.3-201ENST00000634516 308 ntBASIC2.2□□□□□ -2.06
DFFAO00273 ZNF720P1-201ENST00000562403 1939 ntBASIC2.2□□□□□ -2.06
DFFAO00273 CCT4P2-201ENST00000233836 1548 ntBASIC2.2□□□□□ -2.06
DFFAO00273 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
DFFAO00273 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.2□□□□□ -2.06
DFFAO00273 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
DFFAO00273 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
DFFAO00273 RNU6-343P-201ENST00000364709 104 ntBASIC2.19□□□□□ -2.06
DFFAO00273 RNU1-52P-201ENST00000384190 164 ntBASIC2.19□□□□□ -2.06
DFFAO00273 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.19□□□□□ -2.06
DFFAO00273 RNA5SP425-201ENST00000410336 112 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC068533.2-201ENST00000411872 306 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.19□□□□□ -2.06
DFFAO00273 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.19□□□□□ -2.06
DFFAO00273 DPPA3P1-201ENST00000448050 469 ntBASIC2.19□□□□□ -2.06
DFFAO00273 HMGN1P5-201ENST00000448591 263 ntBASIC2.19□□□□□ -2.06
DFFAO00273 ARPC3P5-201ENST00000448802 534 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC011753.1-201ENST00000451001 220 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC233279.1-201ENST00000455300 423 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.19□□□□□ -2.06
DFFAO00273 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
DFFAO00273 MRPL42P6-201ENST00000486397 371 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC109486.1-201ENST00000486833 374 ntBASIC2.19□□□□□ -2.06
DFFAO00273 FAM172BP-201ENST00000487497 1089 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC104090.1-201ENST00000506341 1171 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.19□□□□□ -2.06
DFFAO00273 AC114786.4-201ENST00000508771 728 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC114797.1-201ENST00000514003 728 ntBASIC2.19□□□□□ -2.06
DFFAO00273 RNU6-714P-201ENST00000516963 103 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC022634.1-201ENST00000520765 532 ntBASIC2.19□□□□□ -2.06
DFFAO00273 ATP5F1P5-201ENST00000526403 760 ntBASIC2.19□□□□□ -2.06
DFFAO00273 COX6CP5-201ENST00000527162 228 ntBASIC2.19□□□□□ -2.06
DFFAO00273 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.19□□□□□ -2.06
DFFAO00273 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.19□□□□□ -2.06
DFFAO00273 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.19□□□□□ -2.06
DFFAO00273 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.19□□□□□ -2.06
DFFAO00273 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.19□□□□□ -2.06
DFFAO00273 AC091544.4-201ENST00000555268 342 ntBASIC2.19□□□□□ -2.06
DFFAO00273 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
DFFAO00273 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.19□□□□□ -2.06
DFFAO00273 AC005951.2-201ENST00000576282 495 ntBASIC2.19□□□□□ -2.06
DFFAO00273 MIR4513-201ENST00000581077 86 ntBASIC2.19□□□□□ -2.06
DFFAO00273 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
DFFAO00273 MIR3117-201ENST00000584034 78 ntBASIC2.19□□□□□ -2.06
DFFAO00273 HMGN2P15-201ENST00000585707 270 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
DFFAO00273 AL161729.4-201ENST00000604650 476 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AL512427.1-201ENST00000618593 349 ntBASIC2.19□□□□□ -2.06
DFFAO00273 AL445264.1-201ENST00000621719 171 ntBASIC2.19□□□□□ -2.06
DFFAO00273 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.19□□□□□ -2.06
DFFAO00273 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
DFFAO00273 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 snoZ40.1-201ENST00000364540 72 ntBASIC2.18□□□□□ -2.06
DFFAO00273 Y_RNA.578-201ENST00000390903 88 ntBASIC2.18□□□□□ -2.06
DFFAO00273 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
DFFAO00273 AL109755.1-201ENST00000401791 649 ntBASIC2.18□□□□□ -2.06
DFFAO00273 RN7SKP32-201ENST00000410167 303 ntBASIC2.18□□□□□ -2.06
DFFAO00273 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 UBE2D3P1-201ENST00000436669 444 ntBASIC2.18□□□□□ -2.06
DFFAO00273 UBE2V1P13-201ENST00000436983 439 ntBASIC2.18□□□□□ -2.06
DFFAO00273 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
DFFAO00273 AL118520.1-201ENST00000450770 291 ntBASIC2.18□□□□□ -2.06
DFFAO00273 RPL18AP17-201ENST00000455326 198 ntBASIC2.18□□□□□ -2.06
DFFAO00273 RNU7-136P-201ENST00000458819 69 ntBASIC2.18□□□□□ -2.06
DFFAO00273 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
DFFAO00273 AC108734.3-201ENST00000481241 1165 ntBASIC2.18□□□□□ -2.06
DFFAO00273 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
DFFAO00273 EIF4EP3-201ENST00000498782 656 ntBASIC2.18□□□□□ -2.06
DFFAO00273 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
DFFAO00273 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.18□□□□□ -2.06
DFFAO00273 AC007115.1-201ENST00000546853 234 ntBASIC2.18□□□□□ -2.06
DFFAO00273 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 AC124016.2-201ENST00000610058 665 ntBASIC2.18□□□□□ -2.06
DFFAO00273 AC024257.5-201ENST00000612739 531 ntBASIC2.18□□□□□ -2.06
DFFAO00273 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
DFFAO00273 AC013476.2-201ENST00000614456 459 ntBASIC2.18□□□□□ -2.06
DFFAO00273 AC010378.1-201ENST00000619270 362 ntBASIC2.18□□□□□ -2.06
DFFAO00273 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
DFFAO00273 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms