Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 AC091544.4-201ENST00000555268 342 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 RPS3AP23-202ENST00000574601 686 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 MIR5002-201ENST00000584713 97 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 AP001429.1-201ENST00000602568 530 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 AL161729.4-201ENST00000604650 476 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 AC025594.3-201ENST00000613068 790 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HDGFL3Q9Y3E1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 SNORA38-201ENST00000363946 132 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 RNA5SP138-201ENST00000365098 114 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 RNU6-1300P-201ENST00000391046 108 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 CBWD4P-201ENST00000445695 655 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC008379.1-201ENST00000463655 464 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 MRPS17P3-201ENST00000465453 385 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC112518.2-201ENST00000508565 425 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 RPL23AP94-201ENST00000512518 302 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC023632.1-201ENST00000518463 375 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 BTF3P12-201ENST00000519620 469 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC125611.1-201ENST00000549563 229 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC120053.1-201ENST00000607706 736 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 OR10AB1P-201ENST00000609613 938 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AL136981.2-201ENST00000617319 734 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AL596245.1-201ENST00000618994 362 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC010378.1-201ENST00000619270 362 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC010329.5-201ENST00000623497 2174 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 AC012640.5-201ENST00000623897 319 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 MTND4P1-201ENST00000457501 1466 ntBASIC1.87□□□□□ -2.11
HDGFL3Q9Y3E1 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC080128.1-201ENST00000474389 1917 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 RNU6-741P-201ENST00000383889 107 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL355497.1-201ENST00000406262 551 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC092393.1-201ENST00000439625 742 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL591719.1-201ENST00000444669 744 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 MTCYBP11-201ENST00000447254 1109 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 TRGVB-201ENST00000453257 471 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 RPS15AP17-201ENST00000470598 390 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC108734.3-201ENST00000481241 1165 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC090453.1-201ENST00000495560 436 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 ANXA2P1-201ENST00000505539 926 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC022447.3-201ENST00000506865 495 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 RNU5F-8P-201ENST00000515941 111 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 HSPE1P18-201ENST00000517602 280 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 HSPA8P13-201ENST00000523715 472 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 HSPE1P3-201ENST00000559254 309 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AGGF1P5-201ENST00000567900 919 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC135628.1-201ENST00000568867 534 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC002984.1-201ENST00000591692 448 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL035411.2-201ENST00000604022 421 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC005332.10-201ENST00000612725 619 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC008498.1-201ENST00000613012 531 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AC009090.3-201ENST00000616553 565 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HDGFL3Q9Y3E1 DDX10P1-201ENST00000448545 1933 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 OR56A5-201ENST00000340110 738 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RNU6-220P-201ENST00000390919 107 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RN7SKP32-201ENST00000410167 303 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms