Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AC011460.1-201ENST00000636268 1834 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC103710.2-202ENST00000641454 2853 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC110774.1-201ENST00000623567 2018 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-834P-201ENST00000362367 110 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.44-201ENST00000362676 108 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.309-201ENST00000365046 111 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-214P-201ENST00000384130 107 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 EIF5P1-201ENST00000400019 1231 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 MTCYBP2-201ENST00000407745 171 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC069213.2-201ENST00000420238 366 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 PTGES3P4-201ENST00000426243 356 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AP000942.1-201ENST00000463969 747 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC084198.1-201ENST00000477747 402 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC010409.1-201ENST00000487382 476 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC023424.1-201ENST00000496058 459 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 HMGB3P16-201ENST00000508037 287 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC100870.1-201ENST00000522035 505 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC010186.2-204ENST00000537668 439 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC008083.2-201ENST00000546707 476 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 PSMA6P4-201ENST00000603247 718 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDZRN3Q9UPQ7 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 RNA5SP191-201ENST00000362585 102 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.435-201ENST00000384095 112 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-1207P-201ENST00000384343 107 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 MIR19A-201ENST00000384878 82 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AL357075.1-201ENST00000404107 726 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 MIR1302-4-201ENST00000408701 150 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC079168.2-201ENST00000453977 416 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 RPS15AP1-201ENST00000457423 391 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC068305.1-201ENST00000497406 726 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 BNIP3P5-201ENST00000562290 498 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC090751.1-201ENST00000566966 267 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC009570.1-201ENST00000609599 745 ntBASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
PDZRN3Q9UPQ7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 Z75746.1-201ENST00000440243 2080 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 RN7SKP227-201ENST00000364445 330 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 U3.20-201ENST00000390909 217 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AC007389.2-201ENST00000434630 306 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AC005154.2-201ENST00000438110 379 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 RPS29P9-201ENST00000440360 171 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 TRAPPC2P7-201ENST00000509650 231 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 NDUFB4P9-201ENST00000511646 388 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.686-201ENST00000516548 134 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AP001880.2-201ENST00000538233 448 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AL110118.1-201ENST00000553543 400 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 AC006363.1-201ENST00000603806 463 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 IGHVIII-44-202ENST00000636235 289 ntBASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
PDZRN3Q9UPQ7 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDZRN3Q9UPQ7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms