Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ARL2BPP4-201ENST00000506854 471 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 LDHBP3-201ENST00000514909 822 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 AC034236.3-201ENST00000605999 461 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 Y_RNA.178-201ENST00000363832 102 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 RPS3AP22-201ENST00000488297 769 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 AP000907.2-201ENST00000530827 353 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.54□□□□□ -2.16
SCN11AQ9UI33 AC097468.3-201ENST00000607956 456 ntBASIC1.54□□□□□ -2.16
SCN11AQ9UI33 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SCN11AQ9UI33 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SCN11AQ9UI33 OR1L1-202ENST00000373686 1083 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 RNU1-139P-201ENST00000391307 165 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 AL512504.1-201ENST00000415494 778 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.53□□□□□ -2.16
SCN11AQ9UI33 FABP5P3-201ENST00000437960 408 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 MTCYBP12-201ENST00000440559 1134 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN11AQ9UI33 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 AC105252.1-201ENST00000503089 286 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.53□□□□□ -2.16
SCN11AQ9UI33 AC022662.1-201ENST00000580252 331 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.53□□□□□ -2.16
SCN11AQ9UI33 AC016727.2-201ENST00000603988 621 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 AC020658.4-201ENST00000613987 684 ntBASIC1.53□□□□□ -2.16
SCN11AQ9UI33 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.53□□□□□ -2.17
SCN11AQ9UI33 PGBD4P6-201ENST00000421501 610 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 TRIM60P13-201ENST00000432350 1283 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 PSPHP1-201ENST00000450062 261 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 RFC5P1-201ENST00000454419 874 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 MIR6076-201ENST00000617521 113 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 MTND1P18-201ENST00000448191 573 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 RNU7-26P-201ENST00000458980 63 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 RNU2-44P-201ENST00000516795 194 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 RNU6-943P-201ENST00000516960 98 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AL121821.2-201ENST00000556081 394 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AC005332.10-201ENST00000612725 619 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 MIR4496-201ENST00000635896 61 ntBASIC1.52□□□□□ -2.17
SCN11AQ9UI33 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SCN11AQ9UI33 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SCN11AQ9UI33 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.51□□□□□ -2.17
SCN11AQ9UI33 RNY1P4-201ENST00000384595 115 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 MIR1285-1-201ENST00000408593 84 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 GPM6BP3-201ENST00000442797 145 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 MRPS17P9-201ENST00000511924 393 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 AC087854.1-201ENST00000519706 414 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 HSBP1P1-201ENST00000555205 166 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN11AQ9UI33 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SCN11AQ9UI33 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN11AQ9UI33 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.51□□□□□ -2.17
SCN11AQ9UI33 SDR42E1P2-201ENST00000614861 481 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 SDR42E1P4-201ENST00000620894 481 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 DDX43P2-201ENST00000604753 1354 ntBASIC1.51□□□□□ -2.17
SCN11AQ9UI33 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SCN11AQ9UI33 MIR222-201ENST00000384992 110 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 HMGN1P14-201ENST00000412459 517 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 AL360221.1-201ENST00000445989 335 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.5□□□□□ -2.17
SCN11AQ9UI33 RN7SL793P-201ENST00000583259 296 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN11AQ9UI33 AL096840.1-201ENST00000603287 93 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 BNIP3P7-201ENST00000605641 516 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.5□□□□□ -2.17
SCN11AQ9UI33 MFSD8-213ENST00000641134 1327 ntBASIC1.5□□□□□ -2.17
SCN11AQ9UI33 SNORD56-201ENST00000413522 71 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AC007560.1-201ENST00000426912 237 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 SNRPFP3-201ENST00000457792 225 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.49□□□□□ -2.17
SCN11AQ9UI33 NPM1P52-201ENST00000518264 846 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AP003117.1-201ENST00000602771 554 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AC107214.2-201ENST00000608204 634 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AP001486.3-201ENST00000615334 372 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SCN11AQ9UI33 SNORA3A-201ENST00000364113 130 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 RNU6-1181P-201ENST00000384191 106 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AC021146.8-201ENST00000507455 733 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.49□□□□□ -2.17
SCN11AQ9UI33 SUB1P4-201ENST00000566062 339 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 MIR5000-201ENST00000577717 103 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 AC024619.4-201ENST00000580924 316 ntBASIC1.49□□□□□ -2.17
SCN11AQ9UI33 CUL4AP1-201ENST00000514750 1863 ntBASIC1.48□□□□□ -2.17
SCN11AQ9UI33 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms