Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS45Q9NRW7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS45Q9NRW7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS45Q9NRW7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 RNU1-18P-201ENST00000363062 164 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 RNU6-169P-201ENST00000365336 107 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 RNY3P13-201ENST00000365542 102 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 RNU6-432P-201ENST00000384196 109 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 RNU6-278P-201ENST00000390945 109 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AL109755.1-201ENST00000401791 649 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC007283.2-201ENST00000424739 197 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AL356867.1-201ENST00000429623 299 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC106707.2-201ENST00000484182 374 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC020893.1-201ENST00000502452 580 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 FAM92A1P2-202ENST00000504766 877 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 Y_RNA.693-201ENST00000516641 110 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 RNU6-798P-201ENST00000516912 103 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AK6P1-201ENST00000540219 478 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AL512360.1-201ENST00000555346 234 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC055876.1-202ENST00000567053 138 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 AC139792.3-201ENST00000623525 224 ntBASIC3.92□□□□□ -1.78
VPS45Q9NRW7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
VPS45Q9NRW7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 Y_RNA.409-201ENST00000383990 98 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 RNU6-456P-201ENST00000384493 107 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 RNVU1-14-201ENST00000384770 164 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 RNU6-780P-201ENST00000391030 104 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 RN7SKP285-201ENST00000410137 318 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AL591419.1-201ENST00000427423 339 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 ELOCP14-201ENST00000428070 331 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 ELOCP7-201ENST00000439968 331 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 CYCSP32-201ENST00000440548 321 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 WASF1P1-201ENST00000447560 1131 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AL162389.1-201ENST00000449233 177 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AL133162.1-201ENST00000463228 453 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 HSPE1P6-201ENST00000479457 291 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC104619.4-201ENST00000510773 249 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC100870.1-201ENST00000522035 505 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC109635.3-201ENST00000529536 185 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AP000857.1-201ENST00000532151 543 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 RPL23AP84-201ENST00000571193 464 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC004067.1-201ENST00000608733 700 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC009161.2-201ENST00000624626 138 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC019226.1-201ENST00000625666 515 ntBASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS45Q9NRW7 AC008568.2-201ENST00000623862 2313 ntBASIC3.9□□□□□ -1.78
VPS45Q9NRW7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
VPS45Q9NRW7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS45Q9NRW7 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
VPS45Q9NRW7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.9□□□□□ -1.78
VPS45Q9NRW7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
VPS45Q9NRW7 OR1S2-201ENST00000302592 978 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 Y_RNA.88-201ENST00000363029 99 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 RNU6-108P-201ENST00000365558 107 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 HMGB3P20-201ENST00000417997 600 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS45Q9NRW7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS45Q9NRW7 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.9□□□□□ -1.79
VPS45Q9NRW7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms