Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC023141.4-201ENST00000412031 328 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 UBE2FP1-201ENST00000416536 447 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL031313.1-201ENST00000448435 256 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 RPS15AP36-201ENST00000492022 382 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC026427.2-201ENST00000506228 536 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 MTCYBP23-201ENST00000558717 1102 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 VN1R92P-201ENST00000598511 928 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL020997.2-201ENST00000602607 184 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL596327.1-201ENST00000603629 213 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AC239868.4-201ENST00000608318 671 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL121652.1-201ENST00000608851 448 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 AL133445.2-201ENST00000611191 527 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 MIR7975-201ENST00000619350 68 ntBASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLIRPQ9GZT3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SLIRPQ9GZT3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC080100.1-201ENST00000624239 5356 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 OR5H15-201ENST00000383696 930 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 MIR9-1-201ENST00000385198 89 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RNA5SP120-201ENST00000410900 112 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 USP9YP13-201ENST00000417797 480 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RPS24P13-201ENST00000442520 397 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 MTCO3P45-201ENST00000443036 613 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 TPT1P14-201ENST00000448018 505 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AP000542.1-201ENST00000448473 371 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RPL12P25-201ENST00000455592 494 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RN7SL807P-201ENST00000470923 297 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AL160314.1-201ENST00000490836 438 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC134050.1-201ENST00000495088 933 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 SAP18P1-201ENST00000512058 390 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RNA5SP216-201ENST00000516111 123 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC025755.1-201ENST00000521306 278 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AL359212.1-201ENST00000556608 614 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AF038458.1-201ENST00000588406 262 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 NRBF2P5-201ENST00000603087 788 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AL357094.1-201ENST00000603845 844 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 MTND4LP5-201ENST00000605152 292 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC245517.5-201ENST00000611529 162 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC013562.2-201ENST00000611632 603 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 AC244100.1-202ENST00000621554 382 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SLIRPQ9GZT3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 AP000776.1-201ENST00000530032 1663 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 AL137003.2-201ENST00000606924 2538 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 RNU6-462P-201ENST00000362659 105 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 RNU4-92P-201ENST00000363783 136 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 RNU6-884P-201ENST00000363889 107 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 RNU6-853P-201ENST00000364306 107 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 RNU4-68P-201ENST00000364314 141 ntBASIC2.07□□□□□ -2.08
SLIRPQ9GZT3 SNORD114-30-201ENST00000364448 72 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms