Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC006362.1-201ENST00000567392 174 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AL158211.4-201ENST00000606988 584 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 SNHG22-203ENST00000617833 660 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AL353748.2-201ENST00000622148 471 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 CR392039.5-201ENST00000623201 510 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 AC092656.1-203ENST00000624134 423 ntBASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC28BQ9BUN5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 RNU1-109P-201ENST00000383960 147 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-1074P-201ENST00000383995 104 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 CDK8P2-201ENST00000415020 547 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC006366.1-201ENST00000422002 759 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 RPL35AP22-201ENST00000436855 335 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 THAP5P1-201ENST00000439089 262 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL049734.2-201ENST00000441066 616 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 Z75741.1-201ENST00000446793 314 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL033528.1-201ENST00000453780 140 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC234775.1-201ENST00000454247 670 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 TPTE2P5-203ENST00000458118 728 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 LARP1BP2-201ENST00000486594 519 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC096751.1-202ENST00000502691 1067 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AIG1P1-201ENST00000503376 148 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC091435.1-201ENST00000505442 584 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC079140.3-201ENST00000511111 550 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AP003467.2-201ENST00000520175 319 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL355836.1-201ENST00000555951 870 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC068790.3-201ENST00000602988 553 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 HULC.1-201ENST00000612720 240 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC010678.1-201ENST00000614118 713 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC009159.1-201ENST00000618386 642 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC015967.1-201ENST00000619893 476 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC012150.2-201ENST00000621300 544 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AC039056.2-201ENST00000622261 511 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AP003122.6-201ENST00000623831 495 ntBASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC28BQ9BUN5 AL138713.1-201ENST00000624026 2130 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 TEX21P-201ENST00000447107 1476 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MIR22-201ENST00000362190 85 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-637P-201ENST00000384050 107 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MIR135A2-201ENST00000384854 100 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MIR181A2-201ENST00000384863 110 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-882P-201ENST00000391025 103 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 RNU6-754P-201ENST00000391166 107 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MIR1289-1-201ENST00000408836 144 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 RNU2-43P-201ENST00000410306 190 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 RN7SKP202-201ENST00000410439 330 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC078974.1-201ENST00000411597 223 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 USP9YP13-201ENST00000417797 480 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 YPEL5P1-201ENST00000419731 367 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 MTATP6P4-201ENST00000427725 675 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 HMGN2P31-201ENST00000432430 273 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 PGBD4P3-201ENST00000440731 581 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC010285.1-201ENST00000470580 392 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC103987.1-201ENST00000473394 348 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC055855.1-201ENST00000489563 579 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC022447.1-201ENST00000515358 464 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 SNORA31.1-201ENST00000515993 133 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 SNORA31.5-201ENST00000516190 133 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 HMGN1P28-201ENST00000521340 364 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 FAM60DP-201ENST00000524174 632 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AP000907.2-201ENST00000530827 353 ntBASIC2.84□□□□□ -1.95
CCDC28BQ9BUN5 AP002453.2-201ENST00000533503 320 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms