Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RPL39P36-201ENST00000490784 156 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 ARL4AP2-201ENST00000507378 601 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC026784.1-201ENST00000507986 352 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 APOOP4-201ENST00000513530 597 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-579P-201ENST00000516879 102 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 RNA5SP165-201ENST00000517142 115 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 SNORA31.21-201ENST00000517180 77 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 IGHV3-76-201ENST00000522465 295 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 NCAPGP2-201ENST00000557911 754 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 MIR4429-201ENST00000580105 73 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AL358072.1-201ENST00000604156 575 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 AC006566.1-201ENST00000608943 513 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 RMST_8.1-201ENST00000610287 165 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 MAPK10-322ENST00000641485 4530 ntBASIC3.71□□□□□ -1.82
HERPUD2Q9BSE4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 MIR30E-201ENST00000362104 92 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 RNA5SP139-201ENST00000364340 117 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-641P-201ENST00000384006 107 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 SAR1AP2-201ENST00000392696 594 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 MIR888-201ENST00000401186 77 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 RNU2-39P-201ENST00000410604 198 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 RNU2-68P-201ENST00000410878 191 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 RPS12P24-201ENST00000412619 387 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC006989.1-201ENST00000427212 131 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 MED13P1-201ENST00000428342 171 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 VN1R34P-201ENST00000447387 883 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 FABP5P13-201ENST00000452144 328 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AP002884.2-201ENST00000471647 395 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC007182.2-201ENST00000489251 402 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC012442.3-202ENST00000636742 206 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
HERPUD2Q9BSE4 AC010680.1-201ENST00000590024 3590 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AL359693.1-201ENST00000614959 2407 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RNA5SP124-201ENST00000362739 110 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-884P-201ENST00000363889 107 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RNU6-190P-201ENST00000384154 102 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MIR558-201ENST00000384920 94 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MIR184-201ENST00000384962 84 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RAB9AP3-201ENST00000412737 573 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RPL31P35-201ENST00000431058 377 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RPL36AP53-201ENST00000432891 316 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AL714022.1-201ENST00000439897 151 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RAB9AP1-201ENST00000449393 573 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC026427.2-201ENST00000506228 536 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC105313.1-201ENST00000509121 353 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC110768.1-201ENST00000509222 400 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC117522.1-201ENST00000509821 380 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MIR2276-201ENST00000516886 89 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AP005136.1-201ENST00000579765 429 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC015871.2-201ENST00000603605 948 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MIR92B-201ENST00000607575 96 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC008498.1-201ENST00000613012 531 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC009090.3-201ENST00000616553 565 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
HERPUD2Q9BSE4 AC099506.2-201ENST00000623074 221 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms