Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC079395.3-201ENST00000615161 484 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.6□□□□□ -1.99
NPAS2Q99743 AC116618.1-201ENST00000634617 774 ntBASIC2.6□□□□□ -1.99
NPAS2Q99743 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
NPAS2Q99743 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
NPAS2Q99743 RN7SKP140-201ENST00000411196 284 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AL451054.2-201ENST00000420896 202 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.59□□□□□ -1.99
NPAS2Q99743 AC092427.1-202ENST00000430569 476 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 ATP5F1P1-201ENST00000433775 569 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.59□□□□□ -1.99
NPAS2Q99743 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.59□□□□□ -1.99
NPAS2Q99743 PAXBP1P1-201ENST00000449315 447 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 CACYBPP2-201ENST00000453625 678 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.59□□□□□ -1.99
NPAS2Q99743 AC005410.1-202ENST00000460347 485 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 KC877373.1-201ENST00000479066 408 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 HMGB1P36-201ENST00000487709 576 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AC134050.1-201ENST00000495088 933 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 CDC42P4-201ENST00000510507 563 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.59□□□□□ -1.99
NPAS2Q99743 AC022634.1-201ENST00000520765 532 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.59□□□□□ -1.99
NPAS2Q99743 GLYCAM1-201ENST00000546596 285 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.59□□□□□ -1.99
NPAS2Q99743 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.59□□□□□ -1.99
NPAS2Q99743 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.59□□□□□ -1.99
NPAS2Q99743 AL139344.1-201ENST00000605228 195 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 RPL23AP88-201ENST00000605759 454 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AC009974.1-201ENST00000608881 455 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 AC010133.1-201ENST00000615809 842 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.59□□□□□ -1.99
NPAS2Q99743 PABPC1P9-201ENST00000426076 1612 ntBASIC2.59□□□□□ -1.99
NPAS2Q99743 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.59□□□□□ -2
NPAS2Q99743 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
NPAS2Q99743 CCT4P2-201ENST00000233836 1548 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.58□□□□□ -2
NPAS2Q99743 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.58□□□□□ -2
NPAS2Q99743 AL672167.1-206ENST00000356293 943 ntBASIC2.58□□□□□ -2
NPAS2Q99743 Y_RNA.192-201ENST00000363977 102 ntBASIC2.58□□□□□ -2
NPAS2Q99743 SET-203ENST00000372688 801 ntTSL 2 BASIC2.58□□□□□ -2
NPAS2Q99743 DEFA7P-201ENST00000382676 285 ntBASIC2.58□□□□□ -2
NPAS2Q99743 RNU1-39P-201ENST00000383897 165 ntBASIC2.58□□□□□ -2
NPAS2Q99743 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
NPAS2Q99743 Y_RNA.465-201ENST00000384293 102 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AL360182.1-201ENST00000397433 468 ntBASIC2.58□□□□□ -2
NPAS2Q99743 TXNP7-201ENST00000406296 293 ntBASIC2.58□□□□□ -2
NPAS2Q99743 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
NPAS2Q99743 USP9YP33-201ENST00000412220 421 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 NUP35P1-201ENST00000422734 947 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC007919.1-201ENST00000429380 217 ntBASIC2.58□□□□□ -2
NPAS2Q99743 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 USP9YP35-201ENST00000435696 412 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.58□□□□□ -2
NPAS2Q99743 AL109933.2-201ENST00000452651 260 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC108729.1-201ENST00000487812 947 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
NPAS2Q99743 SUMO2P6-201ENST00000505273 288 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AC098799.2-201ENST00000509466 868 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AC034159.1-201ENST00000513885 583 ntBASIC2.58□□□□□ -2
NPAS2Q99743 RNA5SP216-201ENST00000516111 123 ntBASIC2.58□□□□□ -2
NPAS2Q99743 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.58□□□□□ -2
NPAS2Q99743 HMGB1P41-201ENST00000520234 440 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.58□□□□□ -2
NPAS2Q99743 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.58□□□□□ -2
NPAS2Q99743 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
NPAS2Q99743 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.58□□□□□ -2
NPAS2Q99743 AC025281.1-201ENST00000567026 265 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 MTND1P8-201ENST00000571424 950 ntBASIC2.58□□□□□ -2
NPAS2Q99743 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.58□□□□□ -2
NPAS2Q99743 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
NPAS2Q99743 MIR3162-201ENST00000581818 82 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 AC002545.1-201ENST00000592511 181 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.58□□□□□ -2
NPAS2Q99743 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 AC106052.1-201ENST00000608029 497 ntBASIC2.58□□□□□ -2
NPAS2Q99743 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 AL161734.1-201ENST00000609720 557 ntBASIC2.58□□□□□ -2
NPAS2Q99743 FTX_3.1-201ENST00000610451 147 ntBASIC2.58□□□□□ -2
NPAS2Q99743 TUG1_2.1-201ENST00000614234 87 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC004696.1-201ENST00000614345 607 ntBASIC2.58□□□□□ -2
NPAS2Q99743 SDR42E1P2-201ENST00000614861 481 ntBASIC2.58□□□□□ -2
NPAS2Q99743 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 AL078595.3-201ENST00000623815 1166 ntBASIC2.58□□□□□ -2
NPAS2Q99743 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.58□□□□□ -2
NPAS2Q99743 AC009902.3-201ENST00000606235 2172 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms