Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RNU4-28P-201ENST00000364739 141 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 MIR181A2-201ENST00000384863 110 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AL592148.1-201ENST00000413568 445 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 UBE2FP1-201ENST00000416536 447 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AL451054.2-201ENST00000420896 202 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AL365496.1-201ENST00000426885 215 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 MTCO3P45-201ENST00000443036 613 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 RN7SL499P-201ENST00000481141 276 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC110760.3-202ENST00000515177 371 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 RN7SKP132-201ENST00000516001 208 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 RNA5SP291-201ENST00000517222 105 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 ATP5F1P5-201ENST00000526403 760 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC079600.2-201ENST00000550076 130 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 VN1R90P-201ENST00000595717 726 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC021171.1-201ENST00000603137 706 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC069234.5-201ENST00000611056 416 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC004852.3-201ENST00000614131 326 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 SDR42E1P2-201ENST00000614861 481 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC073308.1-201ENST00000623696 305 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.95□□□□□ -1.94
ZNF560Q96MR9 MTND1P37-201ENST00000636562 264 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC103706.2-201ENST00000638080 240 ntBASIC2.95□□□□□ -1.94
ZNF560Q96MR9 AC092447.7-201ENST00000422212 1621 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 RNU6-859P-201ENST00000362728 107 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 RNU6-217P-201ENST00000384164 104 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AL360182.1-201ENST00000397433 468 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 RSL24D1P4-201ENST00000400938 484 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 RPL22P18-201ENST00000417197 377 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC099548.1-201ENST00000421443 426 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC019097.1-201ENST00000424783 735 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 ARPC3P1-201ENST00000437218 533 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 RNU7-23P-201ENST00000459465 62 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC007954.1-201ENST00000554198 494 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AGGF1P5-201ENST00000567900 919 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 MIR4319-201ENST00000577285 85 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AF038458.1-201ENST00000588406 262 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 TPMTP1-201ENST00000592307 737 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AL031281.1-201ENST00000604049 488 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC004908.2-201ENST00000609090 574 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC068880.5-201ENST00000624331 290 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC110079.1-202ENST00000635213 138 ntBASIC2.94□□□□□ -1.94
ZNF560Q96MR9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.94□□□□□ -1.94
ZNF560Q96MR9 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 Y_RNA.111-201ENST00000363248 100 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 RNU2-33P-201ENST00000410344 192 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 RNA5SP184-201ENST00000411071 108 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 RPL19P1-201ENST00000411635 428 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 RPS24P7-201ENST00000416921 246 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC063976.3-201ENST00000426849 329 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 UBE2FP3-201ENST00000436366 524 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AL049734.2-201ENST00000441066 616 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 Z96811.1-201ENST00000445880 108 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 RAC1P5-201ENST00000512182 576 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC090136.1-201ENST00000520009 240 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC087276.1-201ENST00000529659 480 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AP004247.1-201ENST00000531556 1289 ntBASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.93□□□□□ -1.94
ZNF560Q96MR9 AL133153.1-201ENST00000557756 303 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms