Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AL162395.1-201ENST00000457882 422 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 HMGN2P26-201ENST00000463169 339 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 PSMA2P1-201ENST00000526365 646 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 OR5B10P-201ENST00000532869 642 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC023050.3-201ENST00000541142 333 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 BNIP3P6-201ENST00000549284 499 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 BNIP3P5-201ENST00000562290 498 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AL136221.1-201ENST00000621449 509 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC011155.2-201ENST00000623202 216 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC110801.1-201ENST00000623590 212 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 AC090617.10-201ENST00000624308 134 ntBASIC3.84□□□□□ -1.79
ATG4AQ8WYN0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
ATG4AQ8WYN0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4AQ8WYN0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.8
ATG4AQ8WYN0 AC092326.2-201ENST00000624772 1561 ntBASIC3.84□□□□□ -1.8
ATG4AQ8WYN0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4AQ8WYN0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ATG4AQ8WYN0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 MIR423-201ENST00000362201 94 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 RNU4-20P-201ENST00000365601 151 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC068538.1-201ENST00000376856 336 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 EEF1A1P40-201ENST00000412883 573 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC114491.1-201ENST00000416095 246 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC093106.2-201ENST00000428212 385 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 RPS6P12-201ENST00000432491 726 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 CYCSP43-201ENST00000438233 310 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL118520.1-201ENST00000450770 291 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 SNORD108-201ENST00000459332 71 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 RN7SL323P-201ENST00000494712 295 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC243972.3-201ENST00000539655 198 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC093012.1-202ENST00000549403 582 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL606490.9-201ENST00000603331 271 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC013553.2-201ENST00000604244 589 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC110741.2-201ENST00000605278 268 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC004696.1-201ENST00000614345 607 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 AC007656.2-201ENST00000624902 4547 ntBASIC3.83□□□□□ -1.8
ATG4AQ8WYN0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AL365440.1-201ENST00000436135 2167 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 SNORD115-7-201ENST00000365306 82 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 SMIM11P1-201ENST00000369586 178 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 TXNP7-201ENST00000406296 293 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AL606923.1-201ENST00000406616 190 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 OR6C66P-201ENST00000414917 930 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 PDCL2P1-201ENST00000419302 352 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 CYP4F29P-201ENST00000420685 446 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC244098.2-201ENST00000422068 99 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 DUTP6-201ENST00000425573 462 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 MTCO3P46-201ENST00000425787 232 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 ERLEC1P1-201ENST00000433806 578 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 RPL7P12-201ENST00000446719 750 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 RPL23AP11-201ENST00000475260 469 ntBASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.82□□□□□ -1.8
ATG4AQ8WYN0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms