Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HMGB4Q8WW32 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 BDP1P-201ENST00000582658 1990 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 UBE3AP2-201ENST00000429033 2259 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 Y_RNA.372-201ENST00000365599 102 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 RNU6-641P-201ENST00000384006 107 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 RNU6-701P-201ENST00000384059 107 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 MIR1290-201ENST00000408735 78 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 NDUFB4P7-201ENST00000423198 363 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 MTATP6P16-201ENST00000434543 526 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 UBE2V1P8-201ENST00000437166 265 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 Z99127.3-201ENST00000448158 395 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 HMGN2P16-201ENST00000456802 261 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC126389.1-201ENST00000477436 290 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 RPS4XP13-201ENST00000483219 789 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 SNORA70.18-201ENST00000516696 98 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AP001646.1-201ENST00000527936 915 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 OR4R1P-201ENST00000529879 463 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 NCAPGP2-201ENST00000557911 754 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AP001330.5-201ENST00000607176 411 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC090517.2-201ENST00000614966 680 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC048347.1-201ENST00000624621 427 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AC005609.4-201ENST00000625071 447 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 MIR3651-201ENST00000630427 90 ntBASIC3.67□□□□□ -1.82
HMGB4Q8WW32 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HMGB4Q8WW32 AL672296.1-201ENST00000427780 2158 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 MIR3074-201ENST00000384885 81 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 RNU6-780P-201ENST00000391030 104 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AL513331.1-201ENST00000411908 397 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 HMGB3P20-201ENST00000417997 600 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 SDCBPP3-201ENST00000419629 891 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 USP9YP18-201ENST00000425912 695 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 RPL36AP6-201ENST00000435770 321 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC003071.1-201ENST00000451219 789 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 MTND2P24-201ENST00000453434 806 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC117522.1-201ENST00000509821 380 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 SNORA31.3-201ENST00000516029 96 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 CBX3P5-201ENST00000552017 521 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC011611.1-201ENST00000552179 197 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC027807.1-201ENST00000559921 996 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 HMGB1P33-201ENST00000563485 527 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 HMGB1P6-201ENST00000569046 646 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 MTATP6P3-201ENST00000581686 676 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC067852.3-201ENST00000589177 561 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC020914.4-201ENST00000597690 277 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 DPPA3P3-201ENST00000603842 430 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms