Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AL591719.1-201ENST00000444669 744 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 VN1R10P-201ENST00000447106 875 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 RFC5P1-201ENST00000454419 874 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 SUMO2P2-201ENST00000456482 255 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 RNU6-420P-201ENST00000458780 107 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AL359273.1-201ENST00000510918 627 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 RNA5SP471-201ENST00000516971 106 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 MTCO3P15-201ENST00000526563 574 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC023825.1-201ENST00000566704 1030 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 BNIP3P24-201ENST00000593398 557 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC084824.5-201ENST00000612009 413 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC004852.3-201ENST00000614131 326 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 AC244517.12-201ENST00000623581 663 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 U6.101-201ENST00000637707 76 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 MKKS-204ENST00000639674 192 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 CR848007.1-201ENST00000442354 1699 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 OR4G2P-202ENST00000641004 1759 ntBASIC1.95□□□□□ -2.1
LMX1AQ8TE12 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.95□□□□□ -2.1
LMX1AQ8TE12 RNU6-216P-201ENST00000363282 104 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 SNORA67.1-201ENST00000364749 141 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 MIR135A2-201ENST00000384854 100 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 SNORD65.1-201ENST00000390889 71 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 MTCO1P56-201ENST00000401674 224 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AL450338.1-201ENST00000407987 512 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AF274854.1-201ENST00000413236 615 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 MORF4L1P6-201ENST00000418771 268 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 RPS15AP7-201ENST00000439294 405 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC092393.1-201ENST00000439625 742 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC007677.1-201ENST00000445757 515 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 MTCYBP11-201ENST00000447254 1109 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AL353691.1-201ENST00000451332 387 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC087588.1-201ENST00000462203 316 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 RBM43P1-201ENST00000476891 1081 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 RPS27P26-201ENST00000494583 239 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC135721.1-201ENST00000497954 479 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 COX7A2P2-201ENST00000505291 250 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 RNU6-991P-201ENST00000516168 107 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 RNU6-467P-201ENST00000517027 110 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 HSPA8P13-201ENST00000523715 472 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 CYB5AP5-201ENST00000549779 389 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 HSPE1P3-201ENST00000559254 309 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC110588.1-201ENST00000559699 137 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC010546.1-201ENST00000569391 485 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 MYL12BP1-201ENST00000569826 507 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC013444.2-201ENST00000603317 787 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AP002802.2-201ENST00000605877 235 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AL583856.2-201ENST00000606298 543 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AP000943.4-201ENST00000622912 357 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AC010872.1-201ENST00000624225 675 ntBASIC1.94□□□□□ -2.1
LMX1AQ8TE12 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.94□□□□□ -2.1
LMX1AQ8TE12 AL137003.2-201ENST00000606924 2538 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 SNORA63.3-201ENST00000362682 132 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 RNU2-47P-201ENST00000410649 186 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 BEND7P1-201ENST00000422058 457 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC007742.1-201ENST00000425789 329 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 AC013262.1-201ENST00000426710 252 ntBASIC1.93□□□□□ -2.1
LMX1AQ8TE12 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.93□□□□□ -2.1
LMX1AQ8TE12 OR4K11P-201ENST00000431829 904 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms