Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 CYP3A137P-201ENST00000562436 69 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC023824.2-201ENST00000566185 400 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC009902.3-201ENST00000606235 2172 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 RNY1P4-201ENST00000384595 115 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 MIR1304-201ENST00000408243 91 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AL360221.1-201ENST00000445989 335 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 RPL30P11-201ENST00000495304 339 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC109635.4-202ENST00000531666 412 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC084364.2-201ENST00000546924 395 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AC008121.3-201ENST00000618726 433 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 MTND5P25-201ENST00000430499 799 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 OR6K5P-201ENST00000447050 945 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 RNA5SP436-201ENST00000516020 115 ntBASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC0.91□□□□□ -2.26
ALMS1Q8TCU4 Z85995.1-201ENST00000415547 335 ntBASIC0.9□□□□□ -2.26
ALMS1Q8TCU4 AC021382.1-201ENST00000483523 359 ntBASIC0.9□□□□□ -2.26
ALMS1Q8TCU4 TRAV28-201ENST00000557548 323 ntBASIC0.9□□□□□ -2.26
ALMS1Q8TCU4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.9□□□□□ -2.26
ALMS1Q8TCU4 AL096840.1-201ENST00000603287 93 ntBASIC0.9□□□□□ -2.26
ALMS1Q8TCU4 AC243773.3-201ENST00000613270 256 ntBASIC0.9□□□□□ -2.26
ALMS1Q8TCU4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 RNU6-37P-201ENST00000362692 107 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 RNU6-11P-201ENST00000364234 107 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 MIR147B-201ENST00000390185 80 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 MIR758-201ENST00000390227 88 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 AC068135.2-201ENST00000569293 1028 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 CISD1P1-201ENST00000393907 327 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 AC008837.2-201ENST00000513076 418 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 AC007375.1-201ENST00000554513 578 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 OR4K8P-201ENST00000578842 1048 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 RNF6P1-201ENST00000444889 1784 ntBASIC0.9□□□□□ -2.27
ALMS1Q8TCU4 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 RNU6-1181P-201ENST00000384191 106 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 HSPE1P24-201ENST00000450782 238 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC078857.1-201ENST00000469870 667 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC026801.1-201ENST00000497178 464 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 SNORA31.18-201ENST00000517043 134 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 EIF4EP5-201ENST00000528228 640 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 GLYCAM1-201ENST00000546596 285 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 HSBP1P1-201ENST00000555205 166 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 MIR4658-201ENST00000584344 65 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AL022400.1-201ENST00000423946 935 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC114973.1-201ENST00000429057 632 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 MTCYBP12-201ENST00000440559 1134 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 LINC00933-203ENST00000559812 219 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 MIR3117-201ENST00000584034 78 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC011712.1-201ENST00000588959 234 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC145207.9-201ENST00000623802 325 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 RNU6-193P-201ENST00000410977 107 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AC027575.1-201ENST00000481064 460 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 RN7SKP265-201ENST00000516448 223 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 AL391646.1-201ENST00000603860 190 ntBASIC0.89□□□□□ -2.27
ALMS1Q8TCU4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 AL445687.1-201ENST00000439946 251 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 MTCO2P9-201ENST00000503214 694 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 AC025016.1-201ENST00000616746 682 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 Y_RNA.458-201ENST00000384240 102 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 MTCO1P48-201ENST00000448024 1096 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 RPS29P23-201ENST00000458635 123 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 NCOR1P1-202ENST00000486162 291 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 RNA5SP384-201ENST00000516615 116 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 RNU6-405P-201ENST00000516637 110 ntBASIC0.88□□□□□ -2.27
ALMS1Q8TCU4 RNU6-467P-201ENST00000517027 110 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms