Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CCDC112Q8NEF3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 RNU6-792P-201ENST00000363490 107 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 OR1L1-202ENST00000373686 1083 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 RNU6-481P-201ENST00000384194 107 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 RNU6-220P-201ENST00000390919 107 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AL355615.1-201ENST00000406187 641 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 RN7SKP32-201ENST00000410167 303 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 ARF4P4-201ENST00000439608 520 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 HMGN1P5-201ENST00000448591 263 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC068587.2-201ENST00000478386 781 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 OR4G11P-201ENST00000492842 939 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC048346.1-201ENST00000510247 144 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 RNU2-44P-201ENST00000516795 194 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 MTCYBP27-201ENST00000555160 670 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 SULT1C2P1-202ENST00000562418 459 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 ZNF92P2-201ENST00000600543 1059 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC079791.1-201ENST00000605356 973 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC093838.1-201ENST00000613014 469 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AC006213.4-201ENST00000616184 634 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 AL356585.4-201ENST00000623078 1229 ntBASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC112Q8NEF3 MTND4P21-201ENST00000453886 1357 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL354685.2-201ENST00000448218 1447 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 RNU6-582P-201ENST00000362989 107 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 RNU6-482P-201ENST00000391068 107 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 SNORA46.1-201ENST00000391069 153 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC016769.3-201ENST00000396562 315 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL035405.1-201ENST00000400795 710 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 UBE2V1P15-201ENST00000407776 448 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL356379.1-201ENST00000414105 126 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC246680.2-201ENST00000422106 389 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL591806.2-201ENST00000433122 173 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 TAAR7P-201ENST00000436141 242 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 OSTCP8-201ENST00000445117 448 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 DDX3P2-201ENST00000446138 111 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL136380.1-201ENST00000447970 162 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 MTATP6P7-201ENST00000453315 681 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 MTCO3P11-201ENST00000455103 774 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 TPRKBP1-201ENST00000456243 481 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 PPP1R2P5-201ENST00000457256 603 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 KLF3P2-201ENST00000465138 268 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 HSPE1P3-201ENST00000559254 309 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC024614.2-201ENST00000577584 372 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC090897.2-201ENST00000581715 130 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC008749.1-201ENST00000597650 306 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC013553.2-201ENST00000604244 589 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC135507.1-201ENST00000607214 561 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AP001521.1-201ENST00000609150 300 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AL592148.2-201ENST00000612210 372 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC025594.3-201ENST00000613068 790 ntBASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC112Q8NEF3 AC080128.1-201ENST00000474389 1917 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 RNU6-650P-201ENST00000365658 111 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 MIR135A2-201ENST00000384854 100 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 SEPT2P1-201ENST00000419651 180 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AL512844.2-201ENST00000433990 593 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC009237.8-201ENST00000445492 379 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AL096803.2-201ENST00000450032 677 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 RNU7-140P-201ENST00000459546 60 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC010468.3-201ENST00000508225 458 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 RNU7-193P-201ENST00000516723 65 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 RNA5SP135-201ENST00000517019 125 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 BTF3P12-201ENST00000519620 469 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC011611.5-201ENST00000552477 578 ntBASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC112Q8NEF3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms