Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AP002360.4-201ENST00000606980 481 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 uc_338.1-201ENST00000612113 180 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AL450472.3-201ENST00000615578 367 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 U6atac.1-201ENST00000616025 117 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC048347.1-201ENST00000624621 427 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC068724.3-201ENST00000625906 87 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RNU1-70P-201ENST00000362618 164 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 Y_RNA.248-201ENST00000364501 109 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RNU6-1103P-201ENST00000384150 107 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 MTCO3P40-201ENST00000392516 676 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RPL21P3-201ENST00000395517 478 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RPS3AP24-201ENST00000407896 734 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RNU6-516P-201ENST00000411381 104 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AL035423.1-201ENST00000420331 213 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 EIF1P1-201ENST00000421436 341 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 BEND7P1-201ENST00000422058 457 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 CYCSP4-201ENST00000429682 331 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 FCF1P1-201ENST00000432690 571 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC119618.1-201ENST00000434191 222 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 MTATP6P23-201ENST00000440153 476 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RBMX2P4-201ENST00000441256 376 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 snoU13.4-201ENST00000458916 104 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC146507.2-201ENST00000460608 476 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC108860.1-201ENST00000484521 383 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RPL7P23-201ENST00000493874 747 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC019235.1-201ENST00000503847 207 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 HMGB1P29-201ENST00000505659 499 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RNU6-64P-201ENST00000517119 105 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC090572.1-201ENST00000519251 160 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 IGKV2D-19-201ENST00000523346 262 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 ARL2BPP2-201ENST00000550907 489 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC015917.1-201ENST00000579654 510 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 MIR4293-201ENST00000584305 78 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AL020997.2-201ENST00000602607 184 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC067959.1-201ENST00000604334 379 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 TUG1_1.1-201ENST00000610654 145 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC015967.1-201ENST00000619893 476 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AL356321.1-201ENST00000621360 228 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AL359880.1-201ENST00000621879 266 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC243312.2-201ENST00000623340 601 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 AC244258.1-201ENST00000637553 1071 ntBASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRTM1Q86UE6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 Y_RNA.1-201ENST00000352915 104 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 Y_RNA.256-201ENST00000364594 104 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 Y_RNA.390-201ENST00000383932 102 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 RNU6-637P-201ENST00000384050 107 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 SNORD115-47-201ENST00000391226 86 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 SNORA48.8-201ENST00000391324 134 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 RNA5SP229-201ENST00000410809 99 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 RPL32P35-201ENST00000415214 394 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 CRYBB2P1-203ENST00000415709 538 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 ELOCP4-201ENST00000420090 333 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 DUTP6-201ENST00000425573 462 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 ATP5JP1-201ENST00000431631 322 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 NEK4P1-201ENST00000433383 879 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 AC090774.1-201ENST00000435925 246 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 GAPDHP27-201ENST00000447427 1020 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 RN7SL132P-201ENST00000478131 296 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 RPS15AP36-201ENST00000492022 382 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 HMGN1P11-201ENST00000508668 303 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 AC009646.1-201ENST00000510455 318 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 SAP18P1-201ENST00000512058 390 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 RNA5SP385-201ENST00000515947 110 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 Y_RNA.704-201ENST00000516851 102 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 NRON-201ENST00000517270 370 ntBASIC2.86□□□□□ -1.95
LRRTM1Q86UE6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms