Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC103710.2-201ENST00000609912 942 ntBASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 AC006329.2-201ENST00000611491 394 ntBASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 AC006504.8-201ENST00000621046 635 ntBASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 AC112204.3-201ENST00000623822 332 ntBASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 AC024614.3-201ENST00000637860 256 ntBASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
UBE3BQ7Z3V4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 OR1S2-201ENST00000302592 978 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 MIR423-201ENST00000362201 94 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 Y_RNA.11-201ENST00000362375 109 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RNA5SP197-201ENST00000363357 119 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RNY3P13-201ENST00000365542 102 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RNU6-1009P-201ENST00000390996 107 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RNU2-62P-201ENST00000410868 191 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RNA5SP120-201ENST00000410900 112 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 OR51A5P-201ENST00000415429 942 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC108059.3-201ENST00000456388 214 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 SNORD108-201ENST00000459332 71 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 HMGB1P25-201ENST00000468402 607 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AP000926.1-201ENST00000479573 241 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RPL39P36-201ENST00000490784 156 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 CENPUP1-201ENST00000526649 1202 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC026333.2-201ENST00000542164 106 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RAB11AP2-201ENST00000545905 639 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 HIF1AP1-201ENST00000553642 175 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 MIR3200-201ENST00000580767 85 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 LLPHP1-201ENST00000603571 367 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC007038.2-201ENST00000608095 740 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 RMST_3.1-201ENST00000611651 109 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AC040168.1-201ENST00000623594 991 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UBE3BQ7Z3V4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 Y_RNA.61-201ENST00000362835 102 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 SNORA69-201ENST00000383895 132 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 MIR1-2-201ENST00000384961 85 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AL391417.1-201ENST00000404100 426 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 RNA5SP56-201ENST00000410277 118 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 HMGN1P24-201ENST00000412282 298 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 TPT1P14-201ENST00000448018 505 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AL356010.1-201ENST00000456364 102 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AMD1P1-201ENST00000457220 922 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 RPS3AP50-201ENST00000487064 803 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 SNORD27.1-201ENST00000516319 72 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 SNORA70.24-201ENST00000517233 118 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC098848.2-201ENST00000588023 330 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 GLUD1P4-201ENST00000590914 418 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 Z84480.1-201ENST00000605131 311 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 BNIP3P10-201ENST00000605360 577 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC004908.2-201ENST00000609090 574 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC024940.5-201ENST00000622889 474 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 AC068647.1-201ENST00000489539 2265 ntBASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.3□□□□□ -1.72
UBE3BQ7Z3V4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 RNU6-989P-201ENST00000362756 107 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 SNORA70E-201ENST00000384492 135 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 RNU6-606P-201ENST00000384721 111 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 MIR491-201ENST00000384877 84 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 MT-TC-201ENST00000387405 66 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 Z98941.1-201ENST00000407764 100 ntBASIC4.29□□□□□ -1.72
UBE3BQ7Z3V4 RN7SKP111-201ENST00000410349 271 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms