Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC004696.1-201ENST00000614345 607 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 uc_338.12-201ENST00000616344 181 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 AC099654.13-201ENST00000639774 207 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.14□□□□□ -1.91
NUP54Q7Z3B4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC092104.1-201ENST00000497346 1441 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RNU2-62P-201ENST00000410868 191 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RN7SKP142-201ENST00000411236 328 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RNA5SP107-201ENST00000411358 122 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC093578.1-201ENST00000415219 368 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RPS15AP6-201ENST00000420703 385 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 USP12PX-201ENST00000432383 1057 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC005019.1-201ENST00000436455 431 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 Z82210.1-201ENST00000440037 231 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 PGBD4P3-201ENST00000440731 581 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 Z96811.1-201ENST00000445880 108 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC008264.1-201ENST00000447612 367 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RPS20P20-201ENST00000460498 340 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC087588.1-201ENST00000462203 316 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RPS27P29-201ENST00000463110 252 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RPL21P10-201ENST00000463521 490 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC117522.2-201ENST00000510049 657 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RNU6-928P-201ENST00000516876 104 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RNU6-64P-201ENST00000517119 105 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC107934.2-201ENST00000518653 310 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC107934.1-201ENST00000522215 217 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AP003122.4-201ENST00000530980 758 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC123904.3-201ENST00000547218 814 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC011611.1-201ENST00000552179 197 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 RPL21P5-201ENST00000554662 472 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 NCAPGP2-201ENST00000557911 754 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC005771.1-201ENST00000585581 349 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC009977.1-201ENST00000586015 570 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC010620.2-201ENST00000600135 313 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AL161729.4-201ENST00000604650 476 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC008277.2-201ENST00000605196 797 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 SDR42E1P2-201ENST00000614861 481 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC010133.1-201ENST00000615809 842 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC091953.2-201ENST00000623979 160 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AL513302.2-201ENST00000562313 1842 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 AC093010.3-201ENST00000570269 15214 ntBASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.13□□□□□ -1.91
NUP54Q7Z3B4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MIR30E-201ENST00000362104 92 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 RNU1-39P-201ENST00000383897 165 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MIR325-201ENST00000385260 98 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 ELOCP17-201ENST00000414751 326 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 RPL7P10-201ENST00000417407 739 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC006366.1-201ENST00000422002 759 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC097713.2-201ENST00000430199 356 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 KATNBL1P3-201ENST00000443475 909 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 CBWD4P-201ENST00000445695 655 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 ST13P20-201ENST00000447996 1065 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MRPS31P2-201ENST00000451581 518 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MTND1P12-201ENST00000455231 147 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 SNORD42A-201ENST00000459584 64 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 TTC39CP1-201ENST00000512513 755 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC005951.2-201ENST00000576282 495 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AP005136.1-201ENST00000579765 429 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 MIR4293-201ENST00000584305 78 ntBASIC3.12□□□□□ -1.91
NUP54Q7Z3B4 NBR2-204ENST00000587322 63 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms