Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC012497.1-201ENST00000429392 575 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 AC104806.1-201ENST00000508720 308 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.75□□□□□ -2.29
VPS13CQ709C8 MIR6759-201ENST00000638110 65 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 NACAP2-201ENST00000318548 624 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 Y_RNA.136-201ENST00000363444 102 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 Y_RNA.412-201ENST00000384001 104 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 RNU6-17P-201ENST00000384245 107 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 RNU6-18P-201ENST00000384527 107 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 MIR150-201ENST00000385048 84 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 LINC01347-201ENST00000417964 355 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.75□□□□□ -2.29
VPS13CQ709C8 GTF2IP12-201ENST00000456547 356 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 BZW1P2-201ENST00000473537 826 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 OR5AQ1P-201ENST00000527596 927 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.75□□□□□ -2.29
VPS13CQ709C8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
VPS13CQ709C8 PABPC1P7-201ENST00000413177 1513 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.75□□□□□ -2.29
VPS13CQ709C8 RNU6-997P-201ENST00000384725 107 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 ARF4P4-201ENST00000439608 520 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 PSPHP1-201ENST00000450062 261 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 RPS20P10-201ENST00000451209 253 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.75□□□□□ -2.29
VPS13CQ709C8 AC114322.1-201ENST00000506771 926 ntBASIC0.75□□□□□ -2.29
VPS13CQ709C8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13CQ709C8 RNU4-31P-201ENST00000384211 141 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 RPS29P23-201ENST00000458635 123 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.74□□□□□ -2.29
VPS13CQ709C8 AP003117.1-201ENST00000602771 554 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 OR6C66P-201ENST00000414917 930 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 MTND2P9-201ENST00000422293 931 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 PGBD4P3-201ENST00000440731 581 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 RPS29P28-201ENST00000446439 141 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13CQ709C8 AL035407.2-201ENST00000454090 378 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13CQ709C8 AP001180.3-201ENST00000582221 145 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 SNORD56.5-201ENST00000364281 72 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.74□□□□□ -2.29
VPS13CQ709C8 IPO7P1-201ENST00000442031 636 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13CQ709C8 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
VPS13CQ709C8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
VPS13CQ709C8 RNY4P3-201ENST00000365254 95 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 RPS23P3-201ENST00000470993 430 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 MIR409-201ENST00000362237 79 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 SNORA23-201ENST00000365128 182 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 RNU6-234P-201ENST00000365229 104 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS13CQ709C8 ZNF192P1-203ENST00000565888 810 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 AC012443.1-201ENST00000605605 231 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 C2orf27A-204ENST00000623058 969 ntBASIC0.73□□□□□ -2.29
VPS13CQ709C8 AL139397.2-201ENST00000404529 772 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 AC092832.1-201ENST00000422934 400 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 AL022238.1-201ENST00000442557 355 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VPS13CQ709C8 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 OR4R1P-201ENST00000529879 463 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 SNORA62.1-201ENST00000364287 154 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 AC104308.1-201ENST00000454621 333 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS13CQ709C8 AC090897.2-201ENST00000581715 130 ntBASIC0.72□□□□□ -2.29
VPS13CQ709C8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNU6-1235P-201ENST00000384559 107 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 FCF1P2-201ENST00000415284 583 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 Z95118.1-201ENST00000421372 247 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNU6-498P-201ENST00000459468 107 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RPL21P93-201ENST00000480465 489 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC233702.1-201ENST00000482905 502 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC093591.1-201ENST00000491435 481 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNU6-56P-201ENST00000516986 93 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC087465.1-201ENST00000560574 245 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 BX322635.1-201ENST00000605804 496 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC009452.1-201ENST00000640823 606 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AL390862.1-201ENST00000635467 1469 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 RNU6-16P-201ENST00000384385 107 ntBASIC0.71□□□□□ -2.3
VPS13CQ709C8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.71□□□□□ -2.3
VPS13CQ709C8 AC092451.1-201ENST00000480211 153 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms