Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AP005435.4-201ENST00000529514 284 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC011712.1-201ENST00000588959 234 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC006254.3-201ENST00000603353 884 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AL353621.2-201ENST00000605340 133 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 TUG1_1.1-201ENST00000610654 145 ntBASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.13□□□□□ -1.91
C9orf139Q6ZV77 ZNF285B-201ENST00000561698 1767 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC244517.1-201ENST00000606030 2086 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.11-201ENST00000362375 109 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-845P-201ENST00000362578 103 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-188P-201ENST00000364207 107 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 SNORA62.1-201ENST00000364287 154 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-767P-201ENST00000384132 107 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-332P-201ENST00000391193 108 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AL109755.1-201ENST00000401791 649 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 HSPE1P26-201ENST00000405341 275 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-712P-201ENST00000410558 100 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU2-39P-201ENST00000410604 198 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNA5SP306-201ENST00000411087 107 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-373P-201ENST00000411247 98 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 UBE2FP1-201ENST00000416536 447 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 PDCL2P1-201ENST00000419302 352 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 BEND7P1-201ENST00000422058 457 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 SRIP2-201ENST00000428470 166 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 ATP5JP1-201ENST00000431631 322 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 CBWD4P-201ENST00000445695 655 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RPS29P15-201ENST00000458329 171 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RPL7P23-201ENST00000493874 747 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC116562.3-201ENST00000506136 177 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC092436.1-201ENST00000506450 503 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 NDUFB4P9-201ENST00000511646 388 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC105417.1-201ENST00000514691 285 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1095P-201ENST00000516148 108 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 RN7SKP219-201ENST00000516825 296 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC068587.5-201ENST00000528506 175 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC023050.3-201ENST00000541142 333 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 GLYCAM1-201ENST00000546596 285 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 MIR4775-201ENST00000581168 75 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC024220.1-201ENST00000603675 484 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 MIR4727-201ENST00000622232 55 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC048347.1-201ENST00000624621 427 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC112487.2-201ENST00000637950 304 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 AC100810.6-201ENST00000638068 285 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 ASNSP3-201ENST00000451989 1306 ntBASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf139Q6ZV77 OR4G1P-203ENST00000641984 1631 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC004972.1-201ENST00000623934 2209 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1155P-201ENST00000363554 107 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.509-201ENST00000384506 99 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 Y_RNA.529-201ENST00000384586 119 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL583834.1-201ENST00000406943 343 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 RNU6-1148P-201ENST00000410992 104 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC114491.1-201ENST00000416095 246 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 CYP4F29P-201ENST00000420685 446 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC093106.2-201ENST00000428212 385 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 AC234775.1-201ENST00000454247 670 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 HMGN2P7-201ENST00000456186 273 ntBASIC3.11□□□□□ -1.91
C9orf139Q6ZV77 RPL38P4-201ENST00000502376 214 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms