Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.87□□□□□ -2.11
HMGXB3Q12766 AL121871.1-201ENST00000443413 436 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 RPS27P1-201ENST00000450552 247 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 RPS23P3-201ENST00000470993 430 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 RPL7P18-201ENST00000478965 734 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGXB3Q12766 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGXB3Q12766 SNORA31.23-201ENST00000517219 133 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC036111.3-201ENST00000526389 112 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC008127.2-201ENST00000549925 1075 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 CENPUP2-201ENST00000555897 1186 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.87□□□□□ -2.11
HMGXB3Q12766 MIR4714-201ENST00000580728 77 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 VN1R81P-201ENST00000602085 372 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 AC090525.3-201ENST00000605601 189 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 AL390240.1-201ENST00000612950 384 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
HMGXB3Q12766 AP003122.6-201ENST00000623831 495 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 TEX21P-201ENST00000447107 1476 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC098934.3-201ENST00000430450 190 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 AL691517.1-201ENST00000440833 1235 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 Y_RNA.115-201ENST00000363272 98 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 MIR216A-201ENST00000385063 110 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 IPO7P1-201ENST00000442031 636 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 OR9N1P-202ENST00000494289 481 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC114801.2-201ENST00000503825 781 ntBASIC1.86□□□□□ -2.11
HMGXB3Q12766 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMGXB3Q12766 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.86□□□□□ -2.11
HMGXB3Q12766 MFSD8-213ENST00000641134 1327 ntBASIC1.85□□□□□ -2.11
HMGXB3Q12766 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HMGXB3Q12766 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGXB3Q12766 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.85□□□□□ -2.11
HMGXB3Q12766 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGXB3Q12766 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.85□□□□□ -2.11
HMGXB3Q12766 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.85□□□□□ -2.11
HMGXB3Q12766 PABPC1P3-201ENST00000469174 459 ntBASIC1.85□□□□□ -2.11
HMGXB3Q12766 AL138976.2-201ENST00000563989 694 ntBASIC1.85□□□□□ -2.11
HMGXB3Q12766 MIR3973-201ENST00000579824 107 ntBASIC1.85□□□□□ -2.11
HMGXB3Q12766 AC139769.3-201ENST00000618383 175 ntBASIC1.85□□□□□ -2.11
HMGXB3Q12766 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMGXB3Q12766 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HMGXB3Q12766 MT-TP-201ENST00000387461 68 ntBASIC1.84□□□□□ -2.11
HMGXB3Q12766 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGXB3Q12766 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGXB3Q12766 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGXB3Q12766 COX6CP18-201ENST00000448769 222 ntBASIC1.84□□□□□ -2.11
HMGXB3Q12766 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
HMGXB3Q12766 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGXB3Q12766 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.84□□□□□ -2.11
HMGXB3Q12766 SNORD84-203ENST00000584275 78 ntBASIC1.84□□□□□ -2.11
HMGXB3Q12766 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.84□□□□□ -2.11
HMGXB3Q12766 AL138955.1-201ENST00000622881 1040 ntBASIC1.84□□□□□ -2.11
HMGXB3Q12766 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
HMGXB3Q12766 ZNF734P-201ENST00000419494 1534 ntBASIC1.84□□□□□ -2.12
HMGXB3Q12766 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
HMGXB3Q12766 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
HMGXB3Q12766 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.83□□□□□ -2.12
HMGXB3Q12766 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HMGXB3Q12766 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 RPS26P56-201ENST00000444468 240 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
HMGXB3Q12766 AL020996.3-201ENST00000606617 222 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 uc_338.9-201ENST00000617424 182 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 AL031601.2-202ENST00000622650 282 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 AC116563.2-201ENST00000624751 535 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 AC096656.1-201ENST00000623826 1364 ntBASIC1.83□□□□□ -2.12
HMGXB3Q12766 RNU6-1077P-201ENST00000410506 102 ntBASIC1.82□□□□□ -2.12
HMGXB3Q12766 AC092447.6-201ENST00000414578 210 ntBASIC1.82□□□□□ -2.12
HMGXB3Q12766 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.82□□□□□ -2.12
HMGXB3Q12766 AL591704.2-201ENST00000421658 181 ntBASIC1.82□□□□□ -2.12
HMGXB3Q12766 AC009901.1-201ENST00000506703 541 ntBASIC1.82□□□□□ -2.12
HMGXB3Q12766 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
HMGXB3Q12766 HSPE1P4-201ENST00000550617 308 ntBASIC1.82□□□□□ -2.12
HMGXB3Q12766 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGXB3Q12766 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.82□□□□□ -2.12
HMGXB3Q12766 AC068831.7-201ENST00000616954 363 ntBASIC1.82□□□□□ -2.12
HMGXB3Q12766 CD24P4-201ENST00000382840 243 ntBASIC1.81□□□□□ -2.12
HMGXB3Q12766 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.81□□□□□ -2.12
HMGXB3Q12766 ATG12P2-201ENST00000456830 416 ntBASIC1.81□□□□□ -2.12
HMGXB3Q12766 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGXB3Q12766 RPL37P6-202ENST00000464216 403 ntBASIC1.81□□□□□ -2.12
HMGXB3Q12766 RNU2-44P-201ENST00000516795 194 ntBASIC1.81□□□□□ -2.12
HMGXB3Q12766 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGXB3Q12766 AC245128.3-201ENST00000594721 748 ntBASIC1.81□□□□□ -2.12
HMGXB3Q12766 SNRPGP15-201ENST00000600149 222 ntBASIC1.81□□□□□ -2.12
HMGXB3Q12766 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGXB3Q12766 AL713998.2-201ENST00000604538 1198 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms