Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.13□□□□□ -2.07
TPM4P67936 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM4P67936 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM4P67936 RNA5SP387-201ENST00000364226 106 ntBASIC2.13□□□□□ -2.07
TPM4P67936 RNA5SP125-201ENST00000364843 120 ntBASIC2.13□□□□□ -2.07
TPM4P67936 RNU2-28P-201ENST00000410457 189 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.13□□□□□ -2.07
TPM4P67936 AC246680.2-201ENST00000422106 389 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AL356320.1-201ENST00000429616 163 ntBASIC2.13□□□□□ -2.07
TPM4P67936 MTND4LP7-201ENST00000431728 294 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC234064.1-201ENST00000436312 247 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.13□□□□□ -2.07
TPM4P67936 AL136380.1-201ENST00000447970 162 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.13□□□□□ -2.07
TPM4P67936 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM4P67936 RNA5SP233-201ENST00000459153 113 ntBASIC2.13□□□□□ -2.07
TPM4P67936 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM4P67936 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM4P67936 AC006499.2-201ENST00000513470 337 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.13□□□□□ -2.07
TPM4P67936 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TPM4P67936 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.13□□□□□ -2.07
TPM4P67936 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM4P67936 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.13□□□□□ -2.07
TPM4P67936 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.13□□□□□ -2.07
TPM4P67936 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.13□□□□□ -2.07
TPM4P67936 AC090897.2-201ENST00000581715 130 ntBASIC2.13□□□□□ -2.07
TPM4P67936 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.13□□□□□ -2.07
TPM4P67936 BNIP3P24-201ENST00000593398 557 ntBASIC2.13□□□□□ -2.07
TPM4P67936 BNIP3P33-201ENST00000598912 569 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.13□□□□□ -2.07
TPM4P67936 AC025165.5-201ENST00000602802 578 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AL450270.1-201ENST00000606160 391 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AL589743.7-201ENST00000612637 233 ntBASIC2.13□□□□□ -2.07
TPM4P67936 MIR6798-201ENST00000612887 67 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC007998.5-201ENST00000622938 237 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC073592.7-201ENST00000623659 507 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AL354685.2-201ENST00000448218 1447 ntBASIC2.13□□□□□ -2.07
TPM4P67936 AC009487.4-201ENST00000624969 3585 ntBASIC2.13□□□□□ -2.07
TPM4P67936 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
TPM4P67936 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TPM4P67936 AL133264.1-201ENST00000407157 562 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AL450338.1-201ENST00000407987 512 ntBASIC2.12□□□□□ -2.07
TPM4P67936 BOLA3P4-201ENST00000418151 400 ntBASIC2.12□□□□□ -2.07
TPM4P67936 ZNF90P2-204ENST00000419323 1075 ntBASIC2.12□□□□□ -2.07
TPM4P67936 SFR1P2-201ENST00000421841 730 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.12□□□□□ -2.07
TPM4P67936 PPP1R11P2-201ENST00000423543 382 ntBASIC2.12□□□□□ -2.07
TPM4P67936 CR848007.2-201ENST00000424918 787 ntBASIC2.12□□□□□ -2.07
TPM4P67936 ZNF863P-201ENST00000426746 417 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM4P67936 AC016691.1-201ENST00000441321 413 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.12□□□□□ -2.07
TPM4P67936 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM4P67936 AC013828.1-201ENST00000481845 158 ntBASIC2.12□□□□□ -2.07
TPM4P67936 RPL23AP41-201ENST00000484754 458 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM4P67936 SCARNA3-201ENST00000517097 143 ntBASIC2.12□□□□□ -2.07
TPM4P67936 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM4P67936 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.12□□□□□ -2.07
TPM4P67936 AC024614.2-201ENST00000577584 372 ntBASIC2.12□□□□□ -2.07
TPM4P67936 MIR3200-201ENST00000580767 85 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AL021997.1-201ENST00000605757 193 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AL590396.4-201ENST00000636779 956 ntBASIC2.12□□□□□ -2.07
TPM4P67936 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
TPM4P67936 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TPM4P67936 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.12□□□□□ -2.07
TPM4P67936 RNU1-148P-201ENST00000384472 162 ntBASIC2.11□□□□□ -2.07
TPM4P67936 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
TPM4P67936 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM4P67936 AC096649.2-201ENST00000416186 393 ntBASIC2.11□□□□□ -2.07
TPM4P67936 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.11□□□□□ -2.07
TPM4P67936 FAM204CP-201ENST00000424489 642 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AC007742.1-201ENST00000425789 329 ntBASIC2.11□□□□□ -2.07
TPM4P67936 MTND2P5-201ENST00000432656 1006 ntBASIC2.11□□□□□ -2.07
TPM4P67936 RPL23AP83-201ENST00000434984 473 ntBASIC2.11□□□□□ -2.07
TPM4P67936 ELOCP26-201ENST00000436067 329 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.11□□□□□ -2.07
TPM4P67936 HMGN1P5-201ENST00000448591 263 ntBASIC2.11□□□□□ -2.07
TPM4P67936 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM4P67936 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM4P67936 RPL26P9-201ENST00000457466 433 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM4P67936 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.11□□□□□ -2.07
TPM4P67936 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM4P67936 AP000916.1-201ENST00000533869 835 ntBASIC2.11□□□□□ -2.07
TPM4P67936 HSPE1P3-201ENST00000559254 309 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.11□□□□□ -2.07
TPM4P67936 MIR3162-201ENST00000581818 82 ntBASIC2.11□□□□□ -2.07
TPM4P67936 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AL390838.2-201ENST00000602394 274 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AP000403.1-201ENST00000603349 851 ntBASIC2.11□□□□□ -2.07
TPM4P67936 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.11□□□□□ -2.07
TPM4P67936 FTX_3.1-201ENST00000610451 147 ntBASIC2.11□□□□□ -2.07
TPM4P67936 VN1R9P-201ENST00000614184 867 ntBASIC2.11□□□□□ -2.07
TPM4P67936 SDR42E1P2-201ENST00000614861 481 ntBASIC2.11□□□□□ -2.07
TPM4P67936 SDR42E1P4-201ENST00000620894 481 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AC004009.2-201ENST00000623016 728 ntBASIC2.11□□□□□ -2.07
TPM4P67936 AC025048.6-202ENST00000627667 438 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms