Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC068135.2-201ENST00000569293 1028 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AL354943.1-201ENST00000572103 781 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.89□□□□□ -1.95
SRP54P61011 BNIP3P23-201ENST00000599655 511 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AC021171.1-201ENST00000603137 706 ntBASIC2.89□□□□□ -1.95
SRP54P61011 AC015871.2-201ENST00000603605 948 ntBASIC2.89□□□□□ -1.95
SRP54P61011 BCRP9-201ENST00000605312 388 ntBASIC2.89□□□□□ -1.95
SRP54P61011 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
SRP54P61011 MIR6733-201ENST00000635723 61 ntBASIC2.89□□□□□ -1.95
SRP54P61011 MTND1P37-201ENST00000636562 264 ntBASIC2.89□□□□□ -1.95
SRP54P61011 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SRP54P61011 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.88□□□□□ -1.95
SRP54P61011 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SRP54P61011 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.88□□□□□ -1.95
SRP54P61011 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SRP54P61011 AC096644.4-201ENST00000563417 2912 ntBASIC2.88□□□□□ -1.95
SRP54P61011 OR5J1P-201ENST00000313544 939 ntBASIC2.88□□□□□ -1.95
SRP54P61011 SNORA9.2-201ENST00000365361 133 ntBASIC2.88□□□□□ -1.95
SRP54P61011 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SRP54P61011 RSL24D1P4-201ENST00000400938 484 ntBASIC2.88□□□□□ -1.95
SRP54P61011 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SRP54P61011 AL365496.1-201ENST00000426885 215 ntBASIC2.88□□□□□ -1.95
SRP54P61011 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.88□□□□□ -1.95
SRP54P61011 USP12PX-201ENST00000432383 1057 ntBASIC2.88□□□□□ -1.95
SRP54P61011 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.88□□□□□ -1.95
SRP54P61011 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SRP54P61011 AC093156.1-201ENST00000440382 670 ntBASIC2.88□□□□□ -1.95
SRP54P61011 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.88□□□□□ -1.95
SRP54P61011 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.88□□□□□ -1.95
SRP54P61011 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.88□□□□□ -1.95
SRP54P61011 RNU7-59P-201ENST00000459101 61 ntBASIC2.88□□□□□ -1.95
SRP54P61011 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.88□□□□□ -1.95
SRP54P61011 AP000857.1-201ENST00000532151 543 ntBASIC2.88□□□□□ -1.95
SRP54P61011 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.88□□□□□ -1.95
SRP54P61011 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SRP54P61011 MIR544B-201ENST00000582372 78 ntBASIC2.88□□□□□ -1.95
SRP54P61011 RPL23AP78-201ENST00000599928 470 ntBASIC2.88□□□□□ -1.95
SRP54P61011 AC025588.2-201ENST00000604851 466 ntBASIC2.88□□□□□ -1.95
SRP54P61011 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.88□□□□□ -1.95
SRP54P61011 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.87□□□□□ -1.95
SRP54P61011 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SRP54P61011 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SRP54P61011 VTRNA1-1-201ENST00000363120 99 ntBASIC2.87□□□□□ -1.95
SRP54P61011 RNU1-105P-201ENST00000363470 161 ntBASIC2.87□□□□□ -1.95
SRP54P61011 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SRP54P61011 MIR19A-201ENST00000384878 82 ntBASIC2.87□□□□□ -1.95
SRP54P61011 RPL7P8-201ENST00000411964 730 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.87□□□□□ -1.95
SRP54P61011 AC245054.2-201ENST00000415639 319 ntBASIC2.87□□□□□ -1.95
SRP54P61011 ZNF863P-201ENST00000426746 417 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC007919.1-201ENST00000429380 217 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.87□□□□□ -1.95
SRP54P61011 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.87□□□□□ -1.95
SRP54P61011 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.87□□□□□ -1.95
SRP54P61011 KC877373.1-201ENST00000479066 408 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC138853.1-201ENST00000503549 823 ntBASIC2.87□□□□□ -1.95
SRP54P61011 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.87□□□□□ -1.95
SRP54P61011 HIGD1AP13-201ENST00000509878 289 ntBASIC2.87□□□□□ -1.95
SRP54P61011 LTV1P1-201ENST00000510683 1237 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
SRP54P61011 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.87□□□□□ -1.95
SRP54P61011 RNU6-415P-201ENST00000516252 97 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.87□□□□□ -1.95
SRP54P61011 AC013828.2-201ENST00000532487 235 ntBASIC2.87□□□□□ -1.95
SRP54P61011 GTF3AP2-201ENST00000557014 266 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.87□□□□□ -1.95
SRP54P61011 ELOCP29-201ENST00000588193 334 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.87□□□□□ -1.95
SRP54P61011 AC097655.1-201ENST00000635075 318 ntBASIC2.87□□□□□ -1.95
SRP54P61011 AC092125.1-201ENST00000562568 1995 ntBASIC2.87□□□□□ -1.95
SRP54P61011 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.87□□□□□ -1.95
SRP54P61011 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SRP54P61011 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 CCNG1P1-201ENST00000406783 885 ntBASIC2.86□□□□□ -1.95
SRP54P61011 RPL17P12-201ENST00000413391 526 ntBASIC2.86□□□□□ -1.95
SRP54P61011 USP9YP26-201ENST00000421008 661 ntBASIC2.86□□□□□ -1.95
SRP54P61011 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.86□□□□□ -1.95
SRP54P61011 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
SRP54P61011 RPS24P13-201ENST00000442520 397 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.86□□□□□ -1.95
SRP54P61011 ELOCP30-201ENST00000447108 299 ntBASIC2.86□□□□□ -1.95
SRP54P61011 RPL37P4-201ENST00000448908 268 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC004924.1-201ENST00000480160 781 ntBASIC2.86□□□□□ -1.95
SRP54P61011 MTND2P14-201ENST00000482139 351 ntBASIC2.86□□□□□ -1.95
SRP54P61011 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
SRP54P61011 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SRP54P61011 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.86□□□□□ -1.95
SRP54P61011 AP001372.4-201ENST00000524889 472 ntBASIC2.86□□□□□ -1.95
SRP54P61011 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
SRP54P61011 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.86□□□□□ -1.95
SRP54P61011 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SRP54P61011 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.86□□□□□ -1.95
SRP54P61011 MIR4999-201ENST00000585029 91 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms