Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-114P-201ENST00000384704 105 ntBASIC2.96□□□□□ -1.94
PEX3P56589 U3.20-201ENST00000390909 217 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AL354719.1-201ENST00000406535 843 ntBASIC2.96□□□□□ -1.94
PEX3P56589 RNU2-71P-201ENST00000411395 189 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.96□□□□□ -1.94
PEX3P56589 AC009518.2-201ENST00000418056 731 ntBASIC2.96□□□□□ -1.94
PEX3P56589 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.96□□□□□ -1.94
PEX3P56589 AC090774.1-201ENST00000435925 246 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC004866.2-201ENST00000438285 481 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.96□□□□□ -1.94
PEX3P56589 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.96□□□□□ -1.94
PEX3P56589 RPL7P36-201ENST00000444633 681 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.96□□□□□ -1.94
PEX3P56589 AC108938.1-201ENST00000451204 136 ntBASIC2.96□□□□□ -1.94
PEX3P56589 RPS27AP8-201ENST00000452665 445 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.96□□□□□ -1.94
PEX3P56589 AC010486.3-201ENST00000511602 785 ntBASIC2.96□□□□□ -1.94
PEX3P56589 SNORA31.22-201ENST00000517204 135 ntBASIC2.96□□□□□ -1.94
PEX3P56589 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.96□□□□□ -1.94
PEX3P56589 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.96□□□□□ -1.94
PEX3P56589 PCMTD1P2-201ENST00000565017 355 ntBASIC2.96□□□□□ -1.94
PEX3P56589 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.96□□□□□ -1.94
PEX3P56589 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PEX3P56589 AC011451.2-201ENST00000604303 598 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC092354.1-201ENST00000606057 376 ntBASIC2.96□□□□□ -1.94
PEX3P56589 OR2AS2P-201ENST00000606902 342 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC090617.7-201ENST00000623952 126 ntBASIC2.96□□□□□ -1.94
PEX3P56589 AC079597.1-201ENST00000624306 508 ntBASIC2.96□□□□□ -1.94
PEX3P56589 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PEX3P56589 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.95□□□□□ -1.94
PEX3P56589 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
PEX3P56589 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PEX3P56589 PABPC1P9-201ENST00000426076 1612 ntBASIC2.95□□□□□ -1.94
PEX3P56589 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PEX3P56589 RNU4-21P-201ENST00000362802 126 ntBASIC2.95□□□□□ -1.94
PEX3P56589 RNU6-501P-201ENST00000364072 100 ntBASIC2.95□□□□□ -1.94
PEX3P56589 RNY3P9-201ENST00000384727 106 ntBASIC2.95□□□□□ -1.94
PEX3P56589 U8.14-201ENST00000390843 143 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AL590004.2-201ENST00000404787 371 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.95□□□□□ -1.94
PEX3P56589 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.95□□□□□ -1.94
PEX3P56589 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.95□□□□□ -1.94
PEX3P56589 RPL26P6-201ENST00000440913 438 ntBASIC2.95□□□□□ -1.94
PEX3P56589 TRIM60P18-201ENST00000441518 828 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.95□□□□□ -1.94
PEX3P56589 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 RAC1P7-201ENST00000445367 377 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AL590639.1-201ENST00000456484 337 ntBASIC2.95□□□□□ -1.94
PEX3P56589 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.95□□□□□ -1.94
PEX3P56589 BET1P1-201ENST00000482276 359 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC103975.1-201ENST00000482506 483 ntBASIC2.95□□□□□ -1.94
PEX3P56589 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.95□□□□□ -1.94
PEX3P56589 AC004062.1-201ENST00000509926 645 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC109464.2-201ENST00000510242 943 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.95□□□□□ -1.94
PEX3P56589 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.95□□□□□ -1.94
PEX3P56589 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.95□□□□□ -1.94
PEX3P56589 MED28P6-201ENST00000558776 231 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC110760.3-201ENST00000598794 467 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC121247.2-201ENST00000604776 136 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AL158211.4-201ENST00000606988 584 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AC091965.4-201ENST00000607691 587 ntBASIC2.95□□□□□ -1.94
PEX3P56589 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.95□□□□□ -1.94
PEX3P56589 AL450472.3-201ENST00000615578 367 ntBASIC2.95□□□□□ -1.94
PEX3P56589 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.95□□□□□ -1.94
PEX3P56589 AC078883.4-201ENST00000623218 367 ntBASIC2.95□□□□□ -1.94
PEX3P56589 MIR3974-201ENST00000637126 96 ntBASIC2.95□□□□□ -1.94
PEX3P56589 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PEX3P56589 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PEX3P56589 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC092447.7-201ENST00000422212 1621 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC011460.1-201ENST00000636268 1834 ntBASIC2.94□□□□□ -1.94
PEX3P56589 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
PEX3P56589 AC062016.1-201ENST00000355719 319 ntBASIC2.94□□□□□ -1.94
PEX3P56589 RNU6-859P-201ENST00000362728 107 ntBASIC2.94□□□□□ -1.94
PEX3P56589 RNU5E-8P-201ENST00000363502 116 ntBASIC2.94□□□□□ -1.94
PEX3P56589 MIR634-201ENST00000385208 97 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AL359704.1-201ENST00000411586 781 ntBASIC2.94□□□□□ -1.94
PEX3P56589 CCDC58P2-201ENST00000417131 366 ntBASIC2.94□□□□□ -1.94
PEX3P56589 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 PPP1R11P2-201ENST00000423543 382 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 AC019097.1-201ENST00000424783 735 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC063976.3-201ENST00000426849 329 ntBASIC2.94□□□□□ -1.94
PEX3P56589 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
PEX3P56589 OR4K11P-201ENST00000431829 904 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 THAP5P1-201ENST00000439089 262 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.94□□□□□ -1.94
PEX3P56589 AP000936.2-201ENST00000447151 681 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.94□□□□□ -1.94
PEX3P56589 KATNBL1P6-201ENST00000453433 915 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms