Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH13P55290 SAP18P1-201ENST00000512058 390 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AC117532.1-201ENST00000514638 323 ntBASIC3.15□□□□□ -1.91
CDH13P55290 RNA5SP337-201ENST00000517007 109 ntBASIC3.15□□□□□ -1.91
CDH13P55290 HIGD1AP1-201ENST00000550979 275 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AMZ2P1-203ENST00000565833 850 ntBASIC3.15□□□□□ -1.91
CDH13P55290 HMGB1P6-201ENST00000569046 646 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH13P55290 AC073544.2-201ENST00000601155 540 ntBASIC3.15□□□□□ -1.91
CDH13P55290 DUXAP4-201ENST00000603046 613 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AL161729.4-201ENST00000604650 476 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AP000860.1-201ENST00000605250 559 ntBASIC3.15□□□□□ -1.91
CDH13P55290 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH13P55290 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH13P55290 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH13P55290 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH13P55290 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH13P55290 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH13P55290 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH13P55290 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH13P55290 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH13P55290 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH13P55290 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDH13P55290 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH13P55290 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
CDH13P55290 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH13P55290 RPL32P35-201ENST00000415214 394 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH13P55290 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDH13P55290 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH13P55290 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH13P55290 HMGN2P31-201ENST00000432430 273 ntBASIC3.14□□□□□ -1.91
CDH13P55290 NEK4P1-201ENST00000433383 879 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AL512844.2-201ENST00000433990 593 ntBASIC3.14□□□□□ -1.91
CDH13P55290 HIGD1AP11-201ENST00000438361 280 ntBASIC3.14□□□□□ -1.91
CDH13P55290 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
CDH13P55290 MTATP6P30-201ENST00000443540 664 ntBASIC3.14□□□□□ -1.91
CDH13P55290 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH13P55290 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH13P55290 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.14□□□□□ -1.91
CDH13P55290 AL135752.1-201ENST00000479477 471 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AC068724.1-201ENST00000487100 792 ntBASIC3.14□□□□□ -1.91
CDH13P55290 NDUFB4P2-201ENST00000509515 391 ntBASIC3.14□□□□□ -1.91
CDH13P55290 SNORA31.3-201ENST00000516029 96 ntBASIC3.14□□□□□ -1.91
CDH13P55290 SNORD59.2-201ENST00000516873 68 ntBASIC3.14□□□□□ -1.91
CDH13P55290 RNU2-46P-201ENST00000517038 113 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH13P55290 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.14□□□□□ -1.91
CDH13P55290 AP000873.5-201ENST00000533906 236 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AC034105.3-201ENST00000565294 442 ntBASIC3.14□□□□□ -1.91
CDH13P55290 NBR2-204ENST00000587322 63 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
CDH13P55290 AC008250.2-201ENST00000615261 205 ntBASIC3.14□□□□□ -1.91
CDH13P55290 PISRT1-201ENST00000626175 531 ntBASIC3.14□□□□□ -1.91
CDH13P55290 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.14□□□□□ -1.91
CDH13P55290 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CDH13P55290 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
CDH13P55290 FARSBP1-201ENST00000435808 1778 ntBASIC3.13□□□□□ -1.91
CDH13P55290 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CDH13P55290 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
CDH13P55290 HSPE1P11-201ENST00000339579 310 ntBASIC3.13□□□□□ -1.91
CDH13P55290 U8.3-201ENST00000363321 132 ntBASIC3.13□□□□□ -1.91
CDH13P55290 RNU5E-6P-201ENST00000365574 115 ntBASIC3.13□□□□□ -1.91
CDH13P55290 PTMAP2-201ENST00000397627 327 ntBASIC3.13□□□□□ -1.91
CDH13P55290 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.13□□□□□ -1.91
CDH13P55290 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH13P55290 RNU6-248P-201ENST00000410720 107 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AC007899.1-201ENST00000412776 775 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH13P55290 AC063979.1-201ENST00000415539 377 ntBASIC3.13□□□□□ -1.91
CDH13P55290 RAC1P6-201ENST00000423911 575 ntBASIC3.13□□□□□ -1.91
CDH13P55290 OR2AS1P-201ENST00000427827 319 ntBASIC3.13□□□□□ -1.91
CDH13P55290 FCF1P1-201ENST00000432690 571 ntBASIC3.13□□□□□ -1.91
CDH13P55290 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH13P55290 AC009969.1-201ENST00000438726 172 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH13P55290 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH13P55290 RN7SL432P-201ENST00000484057 298 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AL160314.1-201ENST00000490836 438 ntBASIC3.13□□□□□ -1.91
CDH13P55290 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH13P55290 AC105313.1-201ENST00000509121 353 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH13P55290 RNU6-711P-201ENST00000517255 106 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AP002453.2-201ENST00000533503 320 ntBASIC3.13□□□□□ -1.91
CDH13P55290 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH13P55290 NRBF2P1-201ENST00000587407 859 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH13P55290 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH13P55290 AC079089.3-201ENST00000603094 673 ntBASIC3.13□□□□□ -1.91
CDH13P55290 SEPT7P9-203ENST00000604116 343 ntBASIC3.13□□□□□ -1.91
CDH13P55290 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH13P55290 TEX21P-201ENST00000447107 1476 ntBASIC3.13□□□□□ -1.91
CDH13P55290 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
CDH13P55290 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CDH13P55290 GABRG2-229ENST00000641017 3628 ntBASIC3.13□□□□□ -1.91
CDH13P55290 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH13P55290 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH13P55290 AC233263.6-201ENST00000631132 1963 ntBASIC3.12□□□□□ -1.91
CDH13P55290 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms