Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC022880.1-201ENST00000534017 973 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.35□□□□□ -2.19
POLR2JP52435 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.35□□□□□ -2.19
POLR2JP52435 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.35□□□□□ -2.19
POLR2JP52435 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
POLR2JP52435 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.35□□□□□ -2.19
POLR2JP52435 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.35□□□□□ -2.19
POLR2JP52435 AC018618.2-201ENST00000604770 446 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC010872.1-201ENST00000624225 675 ntBASIC1.35□□□□□ -2.19
POLR2JP52435 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.35□□□□□ -2.19
POLR2JP52435 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.35□□□□□ -2.19
POLR2JP52435 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
POLR2JP52435 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
POLR2JP52435 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
POLR2JP52435 RNU6-1035P-201ENST00000384477 107 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 SNORA26.9-201ENST00000391322 122 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 RPL17P50-201ENST00000396131 546 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
POLR2JP52435 PAICSP7-201ENST00000419829 962 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AC099548.1-201ENST00000421443 426 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AC008481.1-201ENST00000463278 396 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 MTND4LP3-201ENST00000468320 276 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AC068781.1-201ENST00000488231 618 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
POLR2JP52435 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC096745.1-201ENST00000509945 370 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 SNORA31.25-201ENST00000517242 134 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.34□□□□□ -2.19
POLR2JP52435 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AP005597.4-201ENST00000526762 229 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 MIR4287-201ENST00000579398 78 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 AL355877.2-201ENST00000603670 358 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AL035411.2-201ENST00000604022 421 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.34□□□□□ -2.19
POLR2JP52435 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
POLR2JP52435 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC026634.1-201ENST00000634369 198 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.34□□□□□ -2.19
POLR2JP52435 AC017104.5-201ENST00000637647 639 ntBASIC1.34□□□□□ -2.19
POLR2JP52435 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
POLR2JP52435 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
POLR2JP52435 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 OR1L1-202ENST00000373686 1083 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR2JP52435 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR2JP52435 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC007677.1-201ENST00000445757 515 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR2JP52435 Z82190.1-201ENST00000454534 490 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 snoU109.4-201ENST00000458953 143 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 MTCYBP35-201ENST00000503630 1137 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 SUMO2P6-201ENST00000505273 288 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.33□□□□□ -2.2
POLR2JP52435 SNORA48.10-201ENST00000516965 160 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.33□□□□□ -2.2
POLR2JP52435 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC004217.3-201ENST00000551552 878 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC015720.1-201ENST00000565251 277 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AL354943.1-201ENST00000572103 781 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC007229.1-201ENST00000590455 412 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.33□□□□□ -2.2
POLR2JP52435 AC021851.1-201ENST00000608537 1082 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC093838.1-201ENST00000613014 469 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 VN1R9P-201ENST00000614184 867 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC073308.1-201ENST00000623696 305 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC092608.3-201ENST00000625017 386 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
POLR2JP52435 OR5H6-203ENST00000642105 978 ntBASIC1.33□□□□□ -2.2
POLR2JP52435 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
POLR2JP52435 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
POLR2JP52435 CCT4P2-201ENST00000233836 1548 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 RNA5SP276-201ENST00000362580 94 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 RNU6-1155P-201ENST00000363554 107 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
POLR2JP52435 RNU6-882P-201ENST00000391025 103 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 HMGN2P3-201ENST00000433603 273 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.32□□□□□ -2.2
POLR2JP52435 HMGN2P5-201ENST00000436882 273 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.32□□□□□ -2.2
POLR2JP52435 FABP5P3-201ENST00000437960 408 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 AC004383.1-201ENST00000438135 289 ntBASIC1.32□□□□□ -2.2
POLR2JP52435 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms