Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.31□□□□□ -2.04
CX3CR1P49238 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.31□□□□□ -2.04
CX3CR1P49238 AC011477.1-204ENST00000623416 1325 ntBASIC2.31□□□□□ -2.04
CX3CR1P49238 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.31□□□□□ -2.04
CX3CR1P49238 RNU4-92P-201ENST00000363783 136 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 Y_RNA.311-201ENST00000365068 96 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AL590084.2-201ENST00000401481 382 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AL513331.1-201ENST00000411908 397 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC023141.4-201ENST00000412031 328 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.3□□□□□ -2.04
CX3CR1P49238 RPS25P9-201ENST00000435591 252 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.3□□□□□ -2.04
CX3CR1P49238 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 PTENP1-201ENST00000447117 1215 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CX3CR1P49238 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AC107626.1-201ENST00000471084 183 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC011825.1-201ENST00000484967 388 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC108729.1-201ENST00000487812 947 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 SRIP1-201ENST00000489235 288 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC135721.1-201ENST00000497954 479 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 GTF2IP9-201ENST00000502460 301 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC105252.1-201ENST00000503089 286 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC091951.3-201ENST00000504093 246 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC024589.1-201ENST00000512207 263 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.3□□□□□ -2.04
CX3CR1P49238 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AP001372.4-201ENST00000524889 472 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AC079600.2-201ENST00000550076 130 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.3□□□□□ -2.04
CX3CR1P49238 AL451007.1-201ENST00000595491 289 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 BNIP3P33-201ENST00000598912 569 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 SDR42E1P2-201ENST00000614861 481 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AP000776.1-201ENST00000530032 1663 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 AC092447.10-201ENST00000620607 1652 ntBASIC2.3□□□□□ -2.04
CX3CR1P49238 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CR1P49238 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CR1P49238 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CX3CR1P49238 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.29□□□□□ -2.04
CX3CR1P49238 GNG5P1-201ENST00000255500 204 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CX3CR1P49238 RNU6-432P-201ENST00000384196 109 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 Y_RNA.465-201ENST00000384293 102 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 RNU2-49P-201ENST00000410666 184 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CR1P49238 UBE2FP1-201ENST00000416536 447 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.29□□□□□ -2.04
CX3CR1P49238 RPS15AP5-201ENST00000436276 388 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CR1P49238 RPS3AP12-201ENST00000443616 753 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CX3CR1P49238 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 RPL26P9-201ENST00000457466 433 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CR1P49238 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 SCARNA17.1-201ENST00000516211 143 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 RNU6-415P-201ENST00000516252 97 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 SCARNA17.2-201ENST00000516334 143 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 RNA5SP367-201ENST00000516557 118 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 SCARNA1-201ENST00000517138 166 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.29□□□□□ -2.04
CX3CR1P49238 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.29□□□□□ -2.04
CX3CR1P49238 AF038458.1-201ENST00000588406 262 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.29□□□□□ -2.04
CX3CR1P49238 SCARNA17.4-201ENST00000614296 143 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 AC068057.2-201ENST00000624047 895 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 AL137790.1-201ENST00000634283 177 ntBASIC2.29□□□□□ -2.04
CX3CR1P49238 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CX3CR1P49238 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CR1P49238 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.28□□□□□ -2.04
CX3CR1P49238 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
CX3CR1P49238 RN7SKP226-201ENST00000364912 300 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 RNU1-100P-201ENST00000365255 165 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 RNU6-636P-201ENST00000384598 107 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 MIR128-1-201ENST00000384921 82 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 MIR9-1-201ENST00000385198 89 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 AL356057.3-201ENST00000402607 340 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 RNA5SP181-201ENST00000410246 98 ntBASIC2.28□□□□□ -2.04
CX3CR1P49238 SSR1P2-201ENST00000415208 787 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms