Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TMEM167AP1-201ENST00000423409 219 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
LHX1P48742 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.16□□□□□ -1.9
LHX1P48742 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.16□□□□□ -1.9
LHX1P48742 AC244035.1-201ENST00000430042 390 ntBASIC3.16□□□□□ -1.9
LHX1P48742 TIMM9P1-201ENST00000436122 256 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC129850.1-201ENST00000436203 508 ntBASIC3.16□□□□□ -1.9
LHX1P48742 NDUFB4P6-201ENST00000436819 366 ntBASIC3.16□□□□□ -1.9
LHX1P48742 MTATP6P26-201ENST00000445926 662 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.16□□□□□ -1.9
LHX1P48742 AL359385.1-201ENST00000456509 365 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.16□□□□□ -1.9
LHX1P48742 RPS27AP1-201ENST00000475545 471 ntBASIC3.16□□□□□ -1.9
LHX1P48742 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX1P48742 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
LHX1P48742 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX1P48742 AC010265.1-201ENST00000513509 211 ntBASIC3.16□□□□□ -1.9
LHX1P48742 FABP5P5-201ENST00000515537 406 ntBASIC3.16□□□□□ -1.9
LHX1P48742 SCARNA15.2-201ENST00000516409 127 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.16□□□□□ -1.9
LHX1P48742 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.16□□□□□ -1.9
LHX1P48742 OR5G4P-201ENST00000525251 760 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AP002748.2-201ENST00000528671 348 ntBASIC3.16□□□□□ -1.9
LHX1P48742 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LHX1P48742 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.16□□□□□ -1.9
LHX1P48742 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.16□□□□□ -1.9
LHX1P48742 AC005951.2-201ENST00000576282 495 ntBASIC3.16□□□□□ -1.9
LHX1P48742 MIR3146-201ENST00000580367 79 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.16□□□□□ -1.9
LHX1P48742 KC877982.1-201ENST00000602313 470 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC112191.3-201ENST00000604371 277 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC008962.1-201ENST00000605729 304 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC108747.1-201ENST00000609508 535 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC245517.5-201ENST00000611529 162 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.16□□□□□ -1.9
LHX1P48742 AC013476.2-201ENST00000614456 459 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC010133.1-201ENST00000615809 842 ntBASIC3.16□□□□□ -1.9
LHX1P48742 AC002076.2-201ENST00000617362 122 ntBASIC3.16□□□□□ -1.9
LHX1P48742 CU459211.1-201ENST00000635667 749 ntBASIC3.16□□□□□ -1.9
LHX1P48742 CUL1P1-201ENST00000509510 2425 ntBASIC3.16□□□□□ -1.9
LHX1P48742 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.16□□□□□ -1.9
LHX1P48742 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.16□□□□□ -1.9
LHX1P48742 ELL2P3-201ENST00000457883 1602 ntBASIC3.15□□□□□ -1.9
LHX1P48742 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.9
LHX1P48742 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.15□□□□□ -1.9
LHX1P48742 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
LHX1P48742 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LHX1P48742 RNU6-1197P-201ENST00000391183 107 ntBASIC3.15□□□□□ -1.91
LHX1P48742 FCF1P10-201ENST00000407590 479 ntBASIC3.15□□□□□ -1.91
LHX1P48742 Y_RNA.598-201ENST00000410480 95 ntBASIC3.15□□□□□ -1.91
LHX1P48742 NDUFB4P7-201ENST00000423198 363 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AL590383.1-201ENST00000428602 75 ntBASIC3.15□□□□□ -1.91
LHX1P48742 SNRPEP4-201ENST00000435815 279 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC005094.1-201ENST00000440420 368 ntBASIC3.15□□□□□ -1.91
LHX1P48742 COX6CP2-201ENST00000444980 225 ntBASIC3.15□□□□□ -1.91
LHX1P48742 MTND2P4-201ENST00000445034 1004 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX1P48742 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
LHX1P48742 SNRPGP9-201ENST00000456025 225 ntBASIC3.15□□□□□ -1.91
LHX1P48742 SNRPFP4-201ENST00000456366 242 ntBASIC3.15□□□□□ -1.91
LHX1P48742 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX1P48742 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX1P48742 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LHX1P48742 CDC42P4-201ENST00000510507 563 ntBASIC3.15□□□□□ -1.91
LHX1P48742 OR5BM1P-201ENST00000512021 366 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.15□□□□□ -1.91
LHX1P48742 RNU6-390P-201ENST00000516259 103 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC022878.1-201ENST00000530684 149 ntBASIC3.15□□□□□ -1.91
LHX1P48742 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX1P48742 AC123904.3-201ENST00000547218 814 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.15□□□□□ -1.91
LHX1P48742 ACTR3BP3-201ENST00000565577 979 ntBASIC3.15□□□□□ -1.91
LHX1P48742 Z94722.1-201ENST00000604328 474 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC068276.1-201ENST00000605793 379 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AL391813.2-201ENST00000609113 322 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC138749.5-201ENST00000611461 208 ntBASIC3.15□□□□□ -1.91
LHX1P48742 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.15□□□□□ -1.91
LHX1P48742 SDR42E1P2-201ENST00000614861 481 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC116165.2-201ENST00000616705 206 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC068831.7-201ENST00000616954 363 ntBASIC3.15□□□□□ -1.91
LHX1P48742 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.15□□□□□ -1.91
LHX1P48742 AC009878.1-201ENST00000621819 340 ntBASIC3.15□□□□□ -1.91
LHX1P48742 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
LHX1P48742 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LHX1P48742 AC096644.4-201ENST00000563417 2912 ntBASIC3.15□□□□□ -1.91
LHX1P48742 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LHX1P48742 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LHX1P48742 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX1P48742 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LHX1P48742 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LHX1P48742 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
LHX1P48742 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
LHX1P48742 RPL5P18-201ENST00000406671 891 ntBASIC3.14□□□□□ -1.91
LHX1P48742 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
LHX1P48742 AC245054.2-201ENST00000415639 319 ntBASIC3.14□□□□□ -1.91
LHX1P48742 AC098826.1-201ENST00000433943 471 ntBASIC3.14□□□□□ -1.91
LHX1P48742 RPL17P49-201ENST00000443728 411 ntBASIC3.14□□□□□ -1.91
LHX1P48742 RPS20P20-201ENST00000460498 340 ntBASIC3.14□□□□□ -1.91
LHX1P48742 RN7SL633P-201ENST00000488974 297 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms