Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA4P43681 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHRNA4P43681 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5□□□□□ -1.61
CHRNA4P43681 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5□□□□□ -1.61
CHRNA4P43681 MIR4675-201ENST00000577898 77 ntBASIC5□□□□□ -1.61
CHRNA4P43681 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA4P43681 AC012119.1-201ENST00000603184 222 ntBASIC5□□□□□ -1.61
CHRNA4P43681 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5□□□□□ -1.61
CHRNA4P43681 Y_RNA.772-201ENST00000606692 102 ntBASIC5□□□□□ -1.61
CHRNA4P43681 AL589994.2-201ENST00000621124 579 ntBASIC5□□□□□ -1.61
CHRNA4P43681 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA4P43681 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA4P43681 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CHRNA4P43681 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA4P43681 MAPK10-338ENST00000641647 3362 ntBASIC5□□□□□ -1.61
CHRNA4P43681 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
CHRNA4P43681 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA4P43681 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5□□□□□ -1.61
CHRNA4P43681 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA4P43681 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA4P43681 AC116667.1-201ENST00000604855 2072 ntBASIC5□□□□□ -1.61
CHRNA4P43681 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CHRNA4P43681 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CHRNA4P43681 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA4P43681 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CHRNA4P43681 RNU4-90P-201ENST00000362773 141 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 RNA5SP507-201ENST00000363603 121 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 RNU6-595P-201ENST00000363944 107 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 RNU6-45P-201ENST00000384471 107 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 SNORD73A-201ENST00000386062 65 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AL357515.1-201ENST00000402967 542 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 RNU6-257P-201ENST00000410238 98 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 AC006946.1-201ENST00000429106 328 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 EZH2P1-201ENST00000431167 291 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA4P43681 AC073850.1-201ENST00000449243 255 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AC104073.1-201ENST00000451988 151 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AL445433.1-201ENST00000457507 257 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 snoU13.20-201ENST00000459180 104 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 HMGB1P25-201ENST00000468402 607 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 HMGN2P13-201ENST00000476476 274 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA4P43681 RPL30P10-201ENST00000488148 337 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AC073073.1-201ENST00000493920 463 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AC005726.1-201ENST00000494679 427 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AC097462.2-201ENST00000504623 481 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.99□□□□□ -1.61
CHRNA4P43681 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA4P43681 AC108471.1-201ENST00000513977 287 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 RNA5SP392-201ENST00000516905 112 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AP006245.1-201ENST00000522549 120 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA4P43681 ERHP1-201ENST00000523006 310 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.99□□□□□ -1.61
CHRNA4P43681 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.99□□□□□ -1.61
CHRNA4P43681 AL158032.1-201ENST00000605401 106 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 RNU6-85P-201ENST00000605989 107 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.99□□□□□ -1.61
CHRNA4P43681 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CHRNA4P43681 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHRNA4P43681 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 Z95331.1-201ENST00000623075 23112 ntBASIC4.99□□□□□ -1.61
CHRNA4P43681 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA4P43681 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA4P43681 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA4P43681 Y_RNA.215-201ENST00000364204 112 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 RNU6-449P-201ENST00000383914 107 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 RNU6-225P-201ENST00000384613 103 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNA4P43681 RNU6-325P-201ENST00000411132 105 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.98□□□□□ -1.61
CHRNA4P43681 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC093162.1-201ENST00000419682 124 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNA4P43681 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC073063.1-201ENST00000434352 607 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 HSPD1P21-201ENST00000436541 245 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 PIGFP3-201ENST00000441918 722 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.98□□□□□ -1.61
CHRNA4P43681 RPS17P13-201ENST00000448974 407 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 Y_RNA.638-201ENST00000459374 113 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 AL136126.1-201ENST00000473603 402 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 RPL30P1-201ENST00000488676 339 ntBASIC4.98□□□□□ -1.61
CHRNA4P43681 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.98□□□□□ -1.61
CHRNA4P43681 AC113155.1-201ENST00000511141 769 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms