Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD13P35453 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.41□□□□□ -1.86
HOXD13P35453 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD13P35453 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HOXD13P35453 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HOXD13P35453 OR1S2-201ENST00000302592 978 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 MIR148B-201ENST00000362252 99 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 RNA5SP139-201ENST00000364340 117 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 SAR1AP2-201ENST00000392696 594 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
HOXD13P35453 Y_RNA.598-201ENST00000410480 95 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.4□□□□□ -1.87
HOXD13P35453 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXD13P35453 USP9YP13-201ENST00000417797 480 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD13P35453 AC137499.1-201ENST00000427602 88 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 SNORD97-201ENST00000459187 142 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL135752.1-201ENST00000479477 471 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD13P35453 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD13P35453 RNU2-10P-201ENST00000516375 211 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC068657.1-201ENST00000520807 306 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXD13P35453 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD13P35453 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD13P35453 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.6-201ENST00000603753 252 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.11-201ENST00000604059 253 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC008162.1-201ENST00000604718 254 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.1-201ENST00000604752 252 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC007179.3-201ENST00000604976 235 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.5-201ENST00000605253 252 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.12-201ENST00000605291 253 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.8-201ENST00000605353 252 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL670379.7-201ENST00000605823 252 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AL031775.1-201ENST00000607014 887 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC138749.5-201ENST00000611461 208 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC116165.2-201ENST00000616705 206 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 AC108479.2-201ENST00000617314 601 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXD13P35453 AC068057.2-201ENST00000624047 895 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXD13P35453 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HOXD13P35453 MAPK10-322ENST00000641485 4530 ntBASIC3.4□□□□□ -1.87
HOXD13P35453 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD13P35453 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD13P35453 AC010680.1-201ENST00000590024 3590 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD13P35453 RNY4P16-201ENST00000364768 94 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 RNU6-198P-201ENST00000384258 104 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 MT-TH-201ENST00000387441 69 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 RNU2-8P-201ENST00000410727 190 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 BTF3L4P3-201ENST00000418879 476 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD13P35453 AC019097.1-201ENST00000424783 735 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXD13P35453 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD13P35453 AC119618.1-201ENST00000434191 222 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 ARPC3P1-201ENST00000437218 533 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 MTND1P12-201ENST00000455231 147 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC006445.1-201ENST00000491925 405 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.39□□□□□ -1.87
HOXD13P35453 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD13P35453 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD13P35453 TRAV37-201ENST00000553906 342 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC109446.2-201ENST00000567872 497 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD13P35453 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.39□□□□□ -1.87
HOXD13P35453 AL133393.1-201ENST00000603277 287 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 NUTF2P8-201ENST00000604593 363 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC121247.2-201ENST00000604776 136 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 AC025048.6-202ENST00000627667 438 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 MIR622-201ENST00000638396 96 ntBASIC3.39□□□□□ -1.87
HOXD13P35453 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HOXD13P35453 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD13P35453 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
HOXD13P35453 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD13P35453 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD13P35453 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD13P35453 AC091564.4-201ENST00000533934 2194 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
HOXD13P35453 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HOXD13P35453 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HOXD13P35453 RNA5SP374-201ENST00000362939 125 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 CD24P4-201ENST00000382840 243 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 SNORD116-8-201ENST00000384365 95 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AC007899.1-201ENST00000412776 775 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 RPS15AP12-201ENST00000419498 388 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 RAC1P6-201ENST00000423911 575 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AL356583.2-201ENST00000426536 280 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AC129850.1-201ENST00000436203 508 ntBASIC3.38□□□□□ -1.87
HOXD13P35453 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD13P35453 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms