Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RPL23AP32-201ENST00000395315 459 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 RPS3AP36-201ENST00000398190 775 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 RNU2-8P-201ENST00000410727 190 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 Z99755.1-201ENST00000414048 380 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA11P31270 AC133104.1-201ENST00000429100 218 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 EZH2P1-201ENST00000431167 291 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA11P31270 UBE2V1P7-201ENST00000446395 340 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 SSXP4-201ENST00000451349 245 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AC012181.1-201ENST00000479895 423 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA11P31270 PHBP14-201ENST00000512887 367 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA11P31270 RNU6-714P-201ENST00000516963 103 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AC022616.6-201ENST00000520479 119 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA11P31270 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA11P31270 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA11P31270 AL845331.3-202ENST00000562856 261 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 MIR4738-201ENST00000579134 87 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.67□□□□□ -1.82
HOXA11P31270 MIR4276-201ENST00000584832 70 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 C8orf59P2-201ENST00000603441 271 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXA11P31270 BX664608.1-201ENST00000610519 487 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HOXA11P31270 AC009159.1-201ENST00000618386 642 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 AC110994.2-201ENST00000635481 492 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA11P31270 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.67□□□□□ -1.82
HOXA11P31270 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA11P31270 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HOXA11P31270 AC244517.1-201ENST00000606030 2086 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HOXA11P31270 AL161781.1-201ENST00000354277 403 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 Y_RNA.70-201ENST00000362886 110 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 MIR483-201ENST00000385070 76 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC078974.1-201ENST00000411597 223 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXA11P31270 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA11P31270 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXA11P31270 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 MTCO1P20-201ENST00000425366 358 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC002486.1-201ENST00000435098 391 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 ARPC3P1-201ENST00000437218 533 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC127537.2-201ENST00000439258 465 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 CALM1P1-201ENST00000442082 433 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 HSPE1P28-201ENST00000443139 211 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 PABPC1P3-201ENST00000469174 459 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 RN7SL330P-201ENST00000469709 307 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.66□□□□□ -1.82
HOXA11P31270 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA11P31270 AC098799.2-201ENST00000509466 868 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA11P31270 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXA11P31270 SNORA70.19-201ENST00000516717 90 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXA11P31270 NARSP2-201ENST00000518524 679 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 AP003181.2-201ENST00000528941 181 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXA11P31270 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA11P31270 AC037471.2-201ENST00000564941 598 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC025678.1-201ENST00000567861 338 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.66□□□□□ -1.82
HOXA11P31270 XIAPP1-201ENST00000603162 600 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC006254.3-201ENST00000603353 884 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AL390208.1-201ENST00000605885 644 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AL390240.1-201ENST00000612950 384 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 MIR8057-201ENST00000620957 69 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC004009.2-201ENST00000623016 728 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 AC244205.2-202ENST00000635781 342 ntBASIC3.66□□□□□ -1.82
HOXA11P31270 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
HOXA11P31270 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXA11P31270 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.65□□□□□ -1.82
HOXA11P31270 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.65□□□□□ -1.82
HOXA11P31270 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.82
HOXA11P31270 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.82
HOXA11P31270 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXA11P31270 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA11P31270 CBX3P1-201ENST00000325243 554 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA11P31270 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA11P31270 Y_RNA.11-201ENST00000362375 109 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 Y_RNA.38-201ENST00000362617 102 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 RNU6-1085P-201ENST00000363576 107 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 Y_RNA.159-201ENST00000363674 87 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 RNU6-1090P-201ENST00000364065 94 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 SNORD82-201ENST00000365530 70 ntBASIC3.65□□□□□ -1.83
HOXA11P31270 RNU1-39P-201ENST00000383897 165 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms