Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC107626.1-201ENST00000471084 183 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 AC092754.1-201ENST00000472975 479 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 AC022215.1-201ENST00000481770 362 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 MRPL42P6-201ENST00000486397 371 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 AC069499.1-201ENST00000489433 509 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 HMGB3P16-201ENST00000508037 287 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP1P23763 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP1P23763 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.45□□□□□ -1.7
VAMP1P23763 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.45□□□□□ -1.7
VAMP1P23763 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.45□□□□□ -1.7
VAMP1P23763 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.45□□□□□ -1.7
VAMP1P23763 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP1P23763 AC024581.2-201ENST00000619986 252 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.45□□□□□ -1.7
VAMP1P23763 AC097372.5-201ENST00000623665 376 ntBASIC4.45□□□□□ -1.7
VAMP1P23763 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.45□□□□□ -1.7
VAMP1P23763 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP1P23763 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP1P23763 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
VAMP1P23763 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VAMP1P23763 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
VAMP1P23763 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.45□□□□□ -1.7
VAMP1P23763 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.44□□□□□ -1.7
VAMP1P23763 AC107068.1-201ENST00000563286 4218 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.44□□□□□ -1.7
VAMP1P23763 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.44□□□□□ -1.7
VAMP1P23763 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VAMP1P23763 SNORA51.9-201ENST00000384295 124 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 MIR551A-201ENST00000385042 96 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VAMP1P23763 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP1P23763 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP1P23763 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP1P23763 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.44□□□□□ -1.7
VAMP1P23763 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VAMP1P23763 AL161651.1-201ENST00000440882 223 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 NOTCH2P1-201ENST00000443481 624 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP1P23763 AC013470.1-201ENST00000453438 462 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.44□□□□□ -1.7
VAMP1P23763 AC090096.1-201ENST00000489168 390 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP1P23763 RNU5F-8P-201ENST00000515941 111 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 RNU6-976P-201ENST00000516086 111 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 SNORA31.18-201ENST00000517043 134 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 AC006199.1-201ENST00000548728 219 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 AC091516.1-201ENST00000549191 703 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP1P23763 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.44□□□□□ -1.7
VAMP1P23763 MIR6885-201ENST00000612241 66 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 BX005214.3-202ENST00000619809 325 ntBASIC4.44□□□□□ -1.7
VAMP1P23763 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP1P23763 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
VAMP1P23763 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP1P23763 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VAMP1P23763 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VAMP1P23763 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
VAMP1P23763 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP1P23763 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VAMP1P23763 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.43□□□□□ -1.7
VAMP1P23763 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
VAMP1P23763 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP1P23763 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP1P23763 SNORD56.1-201ENST00000362913 68 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 U3.3-201ENST00000362986 216 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 RNU6-105P-201ENST00000363909 104 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 Y_RNA.202-201ENST00000364083 110 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 RN7SKP257-201ENST00000364525 309 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 RNA5SP515-201ENST00000364570 118 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 RNA5SP132-201ENST00000364725 118 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 MIR323B-201ENST00000385269 82 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 ZNF37CP-201ENST00000406795 241 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AC093155.2-201ENST00000420734 937 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP1P23763 LINC00328-2P-201ENST00000436585 219 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP1P23763 ATP5LP2-201ENST00000440646 311 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 PA2G4P1-201ENST00000442248 1197 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP1P23763 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.43□□□□□ -1.7
VAMP1P23763 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.43□□□□□ -1.7
VAMP1P23763 Y_RNA.639-201ENST00000458981 102 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AC025164.1-201ENST00000496249 478 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AC022493.2-201ENST00000506122 481 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP1P23763 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP1P23763 AC004980.4-201ENST00000513375 203 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.43□□□□□ -1.7
VAMP1P23763 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.43□□□□□ -1.7
VAMP1P23763 SNRPGP18-201ENST00000553000 214 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 MTCO3P13-201ENST00000577757 781 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AC023575.1-201ENST00000580510 358 ntBASIC4.43□□□□□ -1.7
VAMP1P23763 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms