Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
VCANP13611 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VCANP13611 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.96□□□□□ -2.26
VCANP13611 AC012443.1-201ENST00000605605 231 ntBASIC0.96□□□□□ -2.26
VCANP13611 U6.98-201ENST00000637157 84 ntBASIC0.96□□□□□ -2.26
VCANP13611 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC0.95□□□□□ -2.26
VCANP13611 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VCANP13611 RN7SKP51-201ENST00000410781 304 ntBASIC0.95□□□□□ -2.26
VCANP13611 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC0.95□□□□□ -2.26
VCANP13611 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.95□□□□□ -2.26
VCANP13611 DPRXP5-201ENST00000604662 539 ntBASIC0.95□□□□□ -2.26
VCANP13611 RNA5SP393-201ENST00000363423 117 ntBASIC0.95□□□□□ -2.26
VCANP13611 RNU6-30P-201ENST00000384561 107 ntBASIC0.95□□□□□ -2.26
VCANP13611 RNA5SP239-201ENST00000410218 129 ntBASIC0.95□□□□□ -2.26
VCANP13611 COX6CP18-201ENST00000448769 222 ntBASIC0.95□□□□□ -2.26
VCANP13611 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.95□□□□□ -2.26
VCANP13611 SNORA31.20-201ENST00000517111 133 ntBASIC0.95□□□□□ -2.26
VCANP13611 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
VCANP13611 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
VCANP13611 ELL2P3-201ENST00000457883 1602 ntBASIC0.95□□□□□ -2.26
VCANP13611 Y_RNA.457-201ENST00000384237 111 ntBASIC0.94□□□□□ -2.26
VCANP13611 MIR513A1-201ENST00000385138 129 ntBASIC0.94□□□□□ -2.26
VCANP13611 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.94□□□□□ -2.26
VCANP13611 AL158823.1-201ENST00000418441 478 ntBASIC0.94□□□□□ -2.26
VCANP13611 RPL7P53-201ENST00000421245 739 ntBASIC0.94□□□□□ -2.26
VCANP13611 AC099336.2-201ENST00000422457 254 ntBASIC0.94□□□□□ -2.26
VCANP13611 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.94□□□□□ -2.26
VCANP13611 AC008379.1-201ENST00000463655 464 ntBASIC0.94□□□□□ -2.26
VCANP13611 HMGN1P10-201ENST00000474557 553 ntBASIC0.94□□□□□ -2.26
VCANP13611 AC012170.1-201ENST00000495139 359 ntBASIC0.94□□□□□ -2.26
VCANP13611 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.94□□□□□ -2.26
VCANP13611 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.94□□□□□ -2.26
VCANP13611 AC010735.1-201ENST00000567305 1026 ntBASIC0.94□□□□□ -2.26
VCANP13611 AC016877.3-201ENST00000606778 504 ntBASIC0.94□□□□□ -2.26
VCANP13611 OR4G3P-201ENST00000633500 913 ntBASIC0.94□□□□□ -2.26
VCANP13611 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
VCANP13611 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
VCANP13611 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.94□□□□□ -2.26
VCANP13611 HMGB1P9-201ENST00000429856 646 ntBASIC0.94□□□□□ -2.26
VCANP13611 IFNA20P-201ENST00000436840 528 ntBASIC0.94□□□□□ -2.26
VCANP13611 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VCANP13611 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VCANP13611 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VCANP13611 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VCANP13611 Y_RNA.170-201ENST00000363746 110 ntBASIC0.94□□□□□ -2.26
VCANP13611 NDUFS5P3-201ENST00000450668 321 ntBASIC0.94□□□□□ -2.26
VCANP13611 MTCYBP37-201ENST00000510642 1133 ntBASIC0.94□□□□□ -2.26
VCANP13611 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.94□□□□□ -2.26
VCANP13611 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC0.94□□□□□ -2.26
VCANP13611 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.93□□□□□ -2.26
VCANP13611 AL139397.2-201ENST00000404529 772 ntBASIC0.93□□□□□ -2.26
VCANP13611 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
VCANP13611 UBE2V2P1-201ENST00000434717 398 ntBASIC0.93□□□□□ -2.26
VCANP13611 AL357520.1-201ENST00000441557 453 ntBASIC0.93□□□□□ -2.26
VCANP13611 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.93□□□□□ -2.26
VCANP13611 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.93□□□□□ -2.26
VCANP13611 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
VCANP13611 AC084373.1-201ENST00000603311 235 ntBASIC0.93□□□□□ -2.26
VCANP13611 AL445213.1-201ENST00000412589 747 ntBASIC0.93□□□□□ -2.26
VCANP13611 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.93□□□□□ -2.26
VCANP13611 DPPA2P1-201ENST00000428060 556 ntBASIC0.93□□□□□ -2.26
VCANP13611 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.93□□□□□ -2.26
VCANP13611 AP001180.3-201ENST00000582221 145 ntBASIC0.93□□□□□ -2.26
VCANP13611 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
VCANP13611 MIR1285-1-201ENST00000408593 84 ntBASIC0.93□□□□□ -2.26
VCANP13611 RPL21P24-201ENST00000413752 448 ntBASIC0.93□□□□□ -2.26
VCANP13611 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.93□□□□□ -2.26
VCANP13611 MTRNR2L2-201ENST00000604882 87 ntBASIC0.93□□□□□ -2.26
VCANP13611 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.93□□□□□ -2.26
VCANP13611 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VCANP13611 SNORD114-15-201ENST00000364687 72 ntBASIC0.92□□□□□ -2.26
VCANP13611 Y_RNA.610-201ENST00000410681 103 ntBASIC0.92□□□□□ -2.26
VCANP13611 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.92□□□□□ -2.26
VCANP13611 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
VCANP13611 AL360221.1-201ENST00000445989 335 ntBASIC0.92□□□□□ -2.26
VCANP13611 AC012181.1-201ENST00000479895 423 ntBASIC0.92□□□□□ -2.26
VCANP13611 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.92□□□□□ -2.26
VCANP13611 AC114322.1-201ENST00000506771 926 ntBASIC0.92□□□□□ -2.26
VCANP13611 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.92□□□□□ -2.26
VCANP13611 MIR6835-201ENST00000621552 64 ntBASIC0.92□□□□□ -2.26
VCANP13611 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
VCANP13611 OR1L1-202ENST00000373686 1083 ntBASIC0.92□□□□□ -2.26
VCANP13611 Y_RNA.572-201ENST00000384757 98 ntBASIC0.92□□□□□ -2.26
VCANP13611 AC015922.2-201ENST00000435593 184 ntBASIC0.92□□□□□ -2.26
VCANP13611 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC0.92□□□□□ -2.26
VCANP13611 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.92□□□□□ -2.26
VCANP13611 AC104692.1-201ENST00000472406 90 ntBASIC0.92□□□□□ -2.26
VCANP13611 RPS26P21-201ENST00000475397 348 ntBASIC0.92□□□□□ -2.26
VCANP13611 TRAV31-201ENST00000502780 342 ntBASIC0.92□□□□□ -2.26
VCANP13611 RNU6-1305P-201ENST00000364353 104 ntBASIC0.91□□□□□ -2.26
VCANP13611 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC0.91□□□□□ -2.26
VCANP13611 RPL21P39-201ENST00000463605 483 ntBASIC0.91□□□□□ -2.26
VCANP13611 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.91□□□□□ -2.26
VCANP13611 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.91□□□□□ -2.26
VCANP13611 AL137072.1-201ENST00000603444 466 ntBASIC0.91□□□□□ -2.26
VCANP13611 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.91□□□□□ -2.26
VCANP13611 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
VCANP13611 RNA5SP276-201ENST00000362580 94 ntBASIC0.91□□□□□ -2.26
VCANP13611 UBE2V1P9-201ENST00000414760 368 ntBASIC0.91□□□□□ -2.26
VCANP13611 PGBD4P6-201ENST00000421501 610 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms