Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 U3.19-201ENST00000390893 196 ntBASIC3.03□□□□□ -1.92
VIMP08670 AL031577.2-201ENST00000404133 280 ntBASIC3.03□□□□□ -1.92
VIMP08670 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 AL096701.2-201ENST00000416920 238 ntBASIC3.03□□□□□ -1.92
VIMP08670 USP9YP13-201ENST00000417797 480 ntBASIC3.03□□□□□ -1.92
VIMP08670 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 BTF3L4P3-201ENST00000418879 476 ntBASIC3.03□□□□□ -1.92
VIMP08670 AC069157.1-201ENST00000421749 137 ntBASIC3.03□□□□□ -1.92
VIMP08670 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.03□□□□□ -1.92
VIMP08670 FCF1P1-201ENST00000432690 571 ntBASIC3.03□□□□□ -1.92
VIMP08670 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 AL133547.1-201ENST00000448546 220 ntBASIC3.03□□□□□ -1.92
VIMP08670 ELOCP23-201ENST00000452014 332 ntBASIC3.03□□□□□ -1.92
VIMP08670 KATNBL1P6-201ENST00000453433 915 ntBASIC3.03□□□□□ -1.92
VIMP08670 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.03□□□□□ -1.92
VIMP08670 AC006499.5-201ENST00000505037 514 ntBASIC3.03□□□□□ -1.92
VIMP08670 RNU6-927P-201ENST00000516199 100 ntBASIC3.03□□□□□ -1.92
VIMP08670 AC022616.6-201ENST00000520479 119 ntBASIC3.03□□□□□ -1.92
VIMP08670 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VIMP08670 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 AC090888.1-201ENST00000561335 1141 ntBASIC3.03□□□□□ -1.92
VIMP08670 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.03□□□□□ -1.92
VIMP08670 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.03□□□□□ -1.92
VIMP08670 MIR5697-201ENST00000578045 78 ntBASIC3.03□□□□□ -1.92
VIMP08670 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.03□□□□□ -1.92
VIMP08670 AC006504.3-201ENST00000586818 523 ntBASIC3.03□□□□□ -1.92
VIMP08670 ELOCP35-201ENST00000604289 336 ntBASIC3.03□□□□□ -1.92
VIMP08670 AC136601.2-201ENST00000604356 474 ntBASIC3.03□□□□□ -1.92
VIMP08670 AL161729.4-201ENST00000604650 476 ntBASIC3.03□□□□□ -1.92
VIMP08670 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
VIMP08670 AC034229.5-201ENST00000624258 185 ntBASIC3.03□□□□□ -1.92
VIMP08670 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.03□□□□□ -1.92
VIMP08670 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.03□□□□□ -1.92
VIMP08670 AC010149.2-201ENST00000637608 315 ntBASIC3.03□□□□□ -1.92
VIMP08670 AC009093.8-201ENST00000641769 292 ntBASIC3.03□□□□□ -1.92
VIMP08670 AC022336.2-201ENST00000568966 2538 ntBASIC3.03□□□□□ -1.92
VIMP08670 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
VIMP08670 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.02□□□□□ -1.93
VIMP08670 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VIMP08670 ZNF285B-201ENST00000561698 1767 ntBASIC3.02□□□□□ -1.93
VIMP08670 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.02□□□□□ -1.93
VIMP08670 AC138915.1-201ENST00000565427 1685 ntBASIC3.02□□□□□ -1.93
VIMP08670 Y_RNA.169-201ENST00000363745 96 ntBASIC3.02□□□□□ -1.93
VIMP08670 RNY3P13-201ENST00000365542 102 ntBASIC3.02□□□□□ -1.93
VIMP08670 RNU6-140P-201ENST00000384566 108 ntBASIC3.02□□□□□ -1.93
VIMP08670 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.02□□□□□ -1.93
VIMP08670 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VIMP08670 BX323014.1-201ENST00000412876 237 ntBASIC3.02□□□□□ -1.93
VIMP08670 RPS29P4-201ENST00000414733 161 ntBASIC3.02□□□□□ -1.93
VIMP08670 ELOCP17-201ENST00000414751 326 ntBASIC3.02□□□□□ -1.93
VIMP08670 BX682237.1-201ENST00000415016 335 ntBASIC3.02□□□□□ -1.93
VIMP08670 Z99497.1-201ENST00000421282 135 ntBASIC3.02□□□□□ -1.93
VIMP08670 ZNF863P-201ENST00000426746 417 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC129850.1-201ENST00000436203 508 ntBASIC3.02□□□□□ -1.93
VIMP08670 RPS29P6-201ENST00000438196 145 ntBASIC3.02□□□□□ -1.93
VIMP08670 AL714022.1-201ENST00000439897 151 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.02□□□□□ -1.93
VIMP08670 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.02□□□□□ -1.93
VIMP08670 AL590365.1-201ENST00000450788 243 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC103987.1-201ENST00000473394 348 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC116337.2-201ENST00000477662 156 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC112204.1-201ENST00000502591 103 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC098862.1-201ENST00000504991 413 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC010486.2-201ENST00000505572 483 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC009901.1-201ENST00000506703 541 ntBASIC3.02□□□□□ -1.93
VIMP08670 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VIMP08670 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.02□□□□□ -1.93
VIMP08670 AC107934.1-201ENST00000522215 217 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.02□□□□□ -1.93
VIMP08670 ATP5F1P5-201ENST00000526403 760 ntBASIC3.02□□□□□ -1.93
VIMP08670 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.02□□□□□ -1.93
VIMP08670 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.02□□□□□ -1.93
VIMP08670 AC011611.1-201ENST00000552179 197 ntBASIC3.02□□□□□ -1.93
VIMP08670 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.02□□□□□ -1.93
VIMP08670 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.02□□□□□ -1.93
VIMP08670 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.02□□□□□ -1.93
VIMP08670 AC135628.1-201ENST00000568867 534 ntBASIC3.02□□□□□ -1.93
VIMP08670 ROCK1P1-201ENST00000573767 549 ntBASIC3.02□□□□□ -1.93
VIMP08670 U73023.1-201ENST00000603134 700 ntBASIC3.02□□□□□ -1.93
VIMP08670 AL022161.1-201ENST00000604390 213 ntBASIC3.02□□□□□ -1.93
VIMP08670 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.02□□□□□ -1.93
VIMP08670 AC068057.2-201ENST00000624047 895 ntBASIC3.02□□□□□ -1.93
VIMP08670 AL034408.1-202ENST00000636088 415 ntBASIC3.02□□□□□ -1.93
VIMP08670 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.02□□□□□ -1.93
VIMP08670 FTLP6-201ENST00000355274 422 ntBASIC3.01□□□□□ -1.93
VIMP08670 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VIMP08670 RNU6-1284P-201ENST00000363701 100 ntBASIC3.01□□□□□ -1.93
VIMP08670 RNY4P16-201ENST00000364768 94 ntBASIC3.01□□□□□ -1.93
VIMP08670 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VIMP08670 MIR200C-201ENST00000384980 68 ntBASIC3.01□□□□□ -1.93
VIMP08670 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 MIR1193-201ENST00000408109 78 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.01□□□□□ -1.93
VIMP08670 AC107081.1-201ENST00000414975 361 ntBASIC3.01□□□□□ -1.93
VIMP08670 HMGN2P30-201ENST00000423237 256 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC018644.1-201ENST00000429934 551 ntBASIC3.01□□□□□ -1.93
VIMP08670 AC010153.1-201ENST00000432862 727 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms