Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 AP001350.1-201ENST00000601906 1524 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD6O43541 AL049780.3-201ENST00000624612 1583 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD6O43541 FRG1BP-201ENST00000278882 761 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MIR423-201ENST00000362201 94 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 Y_RNA.162-201ENST00000363683 102 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 RNU6-744P-201ENST00000365557 107 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 RNU6-730P-201ENST00000383954 104 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 RNU6-1316P-201ENST00000384242 108 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 RNU6-456P-201ENST00000384493 107 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MIR183-201ENST00000384958 110 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 RPS4XP8-201ENST00000402039 771 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AL356432.1-201ENST00000405809 419 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 Z98941.1-201ENST00000407764 100 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MIR1302-11-201ENST00000408051 138 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MIR1302-9-201ENST00000408365 138 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MIR1302-10-201ENST00000408734 138 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC078974.1-201ENST00000411597 223 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MTATP6P18-201ENST00000417994 673 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC019097.1-201ENST00000424783 735 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 HMGN2P20-201ENST00000437531 273 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC025518.1-201ENST00000479856 347 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC090453.1-201ENST00000495560 436 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC103843.2-201ENST00000530523 682 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC078814.3-201ENST00000553036 491 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AL442663.2-201ENST00000554385 511 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC099489.2-201ENST00000574976 260 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC015917.1-201ENST00000579654 510 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.61□□□□□ -1.83
SMAD6O43541 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 AC007566.2-201ENST00000603642 413 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC013553.2-201ENST00000604244 589 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MIR1302-2-201ENST00000607096 138 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 OR10AB1P-201ENST00000609613 938 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC024940.5-201ENST00000622889 474 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 U6.105-201ENST00000637379 88 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD6O43541 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SMAD6O43541 CKAP2P1-201ENST00000555477 2049 ntBASIC3.61□□□□□ -1.83
SMAD6O43541 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD6O43541 AC005183.1-201ENST00000603687 1979 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SMAD6O43541 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD6O43541 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD6O43541 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SMAD6O43541 Y_RNA.58-201ENST00000362807 102 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 Y_RNA.154-201ENST00000363624 102 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RNA5SP42-201ENST00000364278 115 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RNU6-853P-201ENST00000364306 107 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RNY3P1-201ENST00000365085 102 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RNY3-201ENST00000365484 102 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD6O43541 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD6O43541 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMAD6O43541 Y_RNA.394-201ENST00000383942 103 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RNU6-1227P-201ENST00000383981 107 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 Y_RNA.490-201ENST00000384413 102 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AL031679.1-201ENST00000400616 525 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD6O43541 MRPL50P2-201ENST00000416821 482 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AL353777.1-201ENST00000425552 326 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AL606489.2-201ENST00000433886 234 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AL136380.1-201ENST00000447970 162 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 MTND1P18-201ENST00000448191 573 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 RPL7P52-201ENST00000449200 742 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.6□□□□□ -1.83
SMAD6O43541 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.6□□□□□ -1.83
SMAD6O43541 RPS27AP1-201ENST00000475545 471 ntBASIC3.6□□□□□ -1.83
SMAD6O43541 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms