Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC005517.2-201ENST00000424673 553 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 RPL32P28-201ENST00000443577 397 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.78□□□□□ -1.64
SRGAP3O43295 MTND1P9-201ENST00000453775 944 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC133473.1-201ENST00000455173 299 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.78□□□□□ -1.64
SRGAP3O43295 RNU7-180P-201ENST00000459240 63 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.78□□□□□ -1.64
SRGAP3O43295 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.78□□□□□ -1.64
SRGAP3O43295 RPS26P15-201ENST00000488067 348 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC068305.1-201ENST00000497406 726 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.78□□□□□ -1.64
SRGAP3O43295 RNU6-1088P-201ENST00000516850 104 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 Y_RNA.720-201ENST00000517166 92 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.78□□□□□ -1.64
SRGAP3O43295 AP000859.1-201ENST00000525536 307 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRGAP3O43295 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRGAP3O43295 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SRGAP3O43295 AC109635.4-202ENST00000531666 412 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.78□□□□□ -1.64
SRGAP3O43295 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.78□□□□□ -1.64
SRGAP3O43295 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.78□□□□□ -1.64
SRGAP3O43295 AC087499.8-201ENST00000578406 226 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.78□□□□□ -1.64
SRGAP3O43295 MIR5583-1-201ENST00000580941 59 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 MIR3668-201ENST00000582138 75 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AC025588.3-201ENST00000604182 274 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AL590099.1-201ENST00000615276 138 ntBASIC4.78□□□□□ -1.64
SRGAP3O43295 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.78□□□□□ -1.64
SRGAP3O43295 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
SRGAP3O43295 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.65
SRGAP3O43295 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SRGAP3O43295 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.77□□□□□ -1.65
SRGAP3O43295 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SRGAP3O43295 Y_RNA.133-201ENST00000363428 110 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 RNU6-1106P-201ENST00000390845 107 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 RNU2-15P-201ENST00000410692 191 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 HMGN1P24-201ENST00000412282 298 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AC074085.1-201ENST00000413598 418 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 PMCHL1-202ENST00000423102 261 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 OR2AS1P-201ENST00000427827 319 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.77□□□□□ -1.65
SRGAP3O43295 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.77□□□□□ -1.65
SRGAP3O43295 RPL7L1P1-201ENST00000448259 785 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.77□□□□□ -1.65
SRGAP3O43295 MRPS31P2-201ENST00000451581 518 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.77□□□□□ -1.65
SRGAP3O43295 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.77□□□□□ -1.65
SRGAP3O43295 RNU6-1208P-201ENST00000459588 107 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 ST13P14-201ENST00000474095 734 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.77□□□□□ -1.65
SRGAP3O43295 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.77□□□□□ -1.65
SRGAP3O43295 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.77□□□□□ -1.65
SRGAP3O43295 RN7SKP24-201ENST00000515888 284 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 RNU2-10P-201ENST00000516375 211 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 RNU6-988P-201ENST00000519081 107 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 MTND4P7-201ENST00000523876 130 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 COPS8P3-201ENST00000526024 482 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AP000889.2-201ENST00000532684 490 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.77□□□□□ -1.65
SRGAP3O43295 AC018630.1-201ENST00000541376 925 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.77□□□□□ -1.65
SRGAP3O43295 AC090877.1-201ENST00000561418 344 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 MIR4790-201ENST00000577799 79 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 MIR4424-201ENST00000585257 86 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AC093227.2-201ENST00000589357 285 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.77□□□□□ -1.65
SRGAP3O43295 BNIP3P25-201ENST00000596023 559 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 AL390240.1-201ENST00000612950 384 ntBASIC4.77□□□□□ -1.65
SRGAP3O43295 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.77□□□□□ -1.65
SRGAP3O43295 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
SRGAP3O43295 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SRGAP3O43295 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.77□□□□□ -1.65
SRGAP3O43295 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SRGAP3O43295 MTND4P1-201ENST00000457501 1466 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 AL139276.1-201ENST00000311910 1001 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AC011155.1-201ENST00000316512 456 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 RNU6-179P-201ENST00000363350 107 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 Y_RNA.187-201ENST00000363918 113 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 U3.12-201ENST00000364498 214 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 CISD1P1-201ENST00000393907 327 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 UBE2V1P2-201ENST00000397758 440 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AL445189.1-201ENST00000405722 338 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 CYCSP19-201ENST00000411715 316 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.76□□□□□ -1.65
SRGAP3O43295 AC005019.1-201ENST00000436455 431 ntBASIC4.76□□□□□ -1.65
SRGAP3O43295 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.76□□□□□ -1.65
SRGAP3O43295 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms