Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR449B-201ENST00000384995 97 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM38O00635 GSTA9P-201ENST00000406231 611 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 UBE2FP1-201ENST00000416536 447 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 USP9YP27-201ENST00000418455 438 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TRIM38O00635 AL589872.1-201ENST00000426602 288 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM38O00635 AC137499.1-201ENST00000427602 88 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 TIMM9P3-201ENST00000428659 274 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AL358472.1-201ENST00000431295 329 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 CYCSP43-201ENST00000438233 310 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 NOTCH2P1-201ENST00000443481 624 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AC016696.1-201ENST00000446949 318 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 GAPDHP17-201ENST00000449858 1001 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM38O00635 AC008481.1-201ENST00000463278 396 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 RPS4XP13-201ENST00000483219 789 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AC096576.1-201ENST00000489014 359 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 RPS15AP36-201ENST00000492022 382 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM38O00635 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
TRIM38O00635 FGF7P4-201ENST00000509595 295 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 IGKV2D-23-201ENST00000518179 286 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AC099489.2-201ENST00000574976 260 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 MIR4644-201ENST00000579929 84 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM38O00635 AC008739.3-201ENST00000603262 127 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AL160413.1-201ENST00000622780 310 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AC068880.5-201ENST00000624331 290 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM38O00635 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRIM38O00635 MIR1321-201ENST00000637766 79 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM38O00635 IPO8P1-201ENST00000455509 3109 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRIM38O00635 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM38O00635 NCAPGP1-201ENST00000505112 1814 ntBASIC3.95□□□□□ -1.78
TRIM38O00635 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM38O00635 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM38O00635 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM38O00635 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM38O00635 Y_RNA.132-201ENST00000363421 102 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 Y_RNA.138-201ENST00000363462 102 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 RNU4-1-201ENST00000363925 141 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 RNY4P16-201ENST00000364768 94 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 RNU6-483P-201ENST00000384088 108 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 MIR30B-201ENST00000384850 88 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 RPL7P60-201ENST00000397636 735 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC110754.1-201ENST00000399740 601 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 RNU4-55P-201ENST00000410731 137 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 VN1R36P-201ENST00000414936 291 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM38O00635 AL358934.1-201ENST00000432346 324 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC119618.1-201ENST00000434191 222 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM38O00635 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM38O00635 RPS27AP1-201ENST00000475545 471 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 HSPE1P6-201ENST00000479457 291 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM38O00635 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM38O00635 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM38O00635 AC011979.2-201ENST00000527568 352 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM38O00635 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 ZNF192P1-203ENST00000565888 810 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM38O00635 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM38O00635 BDH2P1-201ENST00000602288 736 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AP002826.1-201ENST00000608835 315 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM38O00635 FP236240.3-201ENST00000623061 327 ntBASIC3.94□□□□□ -1.78
TRIM38O00635 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.94□□□□□ -1.78
TRIM38O00635 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM38O00635 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM38O00635 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM38O00635 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM38O00635 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM38O00635 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM38O00635 Y_RNA.58-201ENST00000362807 102 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 Y_RNA.154-201ENST00000363624 102 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RNU6-1284P-201ENST00000363701 100 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RNY3P1-201ENST00000365085 102 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RNY3-201ENST00000365484 102 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 RNY3P13-201ENST00000365542 102 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TRIM38O00635 RNU6-877P-201ENST00000383868 107 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 SNORA36C-201ENST00000384289 132 ntBASIC3.93□□□□□ -1.78
TRIM38O00635 Y_RNA.490-201ENST00000384413 102 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms