Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC093732.2-201ENST00000607950 274 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC239868.4-201ENST00000608318 671 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC122133.1-201ENST00000613964 233 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AL603755.1-201ENST00000619504 163 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AL445264.1-201ENST00000621719 171 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL079343.1-201ENST00000572358 1771 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AC011477.1-204ENST00000623416 1325 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 RNU4-21P-201ENST00000362802 126 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 U8.8-201ENST00000365399 135 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 RNU6-744P-201ENST00000365557 107 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 RNU6-1316P-201ENST00000384242 108 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 MT-TH-201ENST00000387441 69 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL049545.1-201ENST00000401856 572 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL139095.1-201ENST00000404326 391 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AC090960.1-201ENST00000421072 306 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL589823.1-201ENST00000429577 183 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 RABEPKP1-201ENST00000440529 1026 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 MTCO3P11-201ENST00000455103 774 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 EIF4BP1-201ENST00000554881 351 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 BNIP3P23-201ENST00000599655 511 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 U73023.1-201ENST00000603134 700 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 MTCYBP22-201ENST00000603788 447 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AC105129.3-201ENST00000605455 485 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AC104010.1-201ENST00000616889 150 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AL353748.2-201ENST00000622148 471 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AP003122.6-201ENST00000623831 495 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AC079597.1-201ENST00000624306 508 ntBASIC2.54□□□□□ -2
TRIM49D1C9J1S8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
TRIM49D1C9J1S8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 Y_RNA.18-201ENST00000362461 102 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 SNORD62.1-201ENST00000362541 86 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RNU6-1249P-201ENST00000363237 111 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RNU6-809P-201ENST00000384461 107 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AL031577.2-201ENST00000404133 280 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 CCNG1P1-201ENST00000406783 885 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RNU6-712P-201ENST00000410558 100 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RPL21P32-201ENST00000419877 477 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC019178.2-201ENST00000423595 505 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 MTCO2P16-201ENST00000436962 677 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RPS24P13-201ENST00000442520 397 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 RPS20P24-201ENST00000457473 361 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC104472.2-201ENST00000469035 601 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC087190.1-201ENST00000484462 480 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 KLRA1P-201ENST00000503499 986 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC114981.1-201ENST00000503897 678 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 KLHL2P1-201ENST00000508691 521 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC022690.1-201ENST00000526681 550 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AP002748.2-201ENST00000528671 348 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC243972.3-201ENST00000539655 198 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC004853.1-201ENST00000604902 698 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AC108747.1-201ENST00000609508 535 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 CRYM-AS1-204ENST00000637983 556 ntBASIC2.53□□□□□ -2
TRIM49D1C9J1S8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
TRIM49D1C9J1S8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2.01
TRIM49D1C9J1S8 AL445523.1-201ENST00000451184 1362 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL513185.3-201ENST00000433335 1300 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-769P-201ENST00000384407 104 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 U8.14-201ENST00000390843 143 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RPL21P75-201ENST00000396599 483 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RPL21P28-201ENST00000401418 483 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL122016.1-201ENST00000403365 367 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL592114.1-201ENST00000403842 483 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 ATG3P1-201ENST00000419507 911 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL365184.2-201ENST00000431139 435 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms