Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC090666.1-201ENST00000578241 445 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 MIR4713-201ENST00000582691 75 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC005498.1-201ENST00000592125 465 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 PCNAP1-202ENST00000595299 752 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC084373.1-201ENST00000603311 235 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AC026634.1-201ENST00000634369 198 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
LINC01549A6NIU2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 MIR618-201ENST00000385287 98 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 SNORA11.1-201ENST00000408133 129 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 MTCO3P12-201ENST00000416718 547 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AL590233.1-201ENST00000430017 456 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 DYNLT3P2-201ENST00000442517 295 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AL096803.2-201ENST00000450032 677 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC008379.1-201ENST00000463655 464 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 SLC25A15P5-201ENST00000508033 253 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC079148.1-201ENST00000565944 819 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 MIR4421-201ENST00000578133 69 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 OR4G1P-201ENST00000588632 938 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 NTAN1P1-201ENST00000603150 646 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 HSPE1P19-201ENST00000603327 295 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC090132.2-201ENST00000615881 347 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC091953.2-201ENST00000623979 160 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AC091925.2-201ENST00000625059 256 ntBASIC0.71□□□□□ -2.3
LINC01549A6NIU2 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
LINC01549A6NIU2 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AL356292.1-201ENST00000283110 373 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 RN7SKP158-201ENST00000410453 326 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 RN7SKP61-201ENST00000410642 295 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 MTCYBP3-201ENST00000445588 1137 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 COX6CP18-201ENST00000448769 222 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 LARP7P4-201ENST00000481075 878 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 FAM92A1P2-202ENST00000504766 877 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 RNU6-362P-201ENST00000516736 90 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AL512598.1-201ENST00000610158 273 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AC096586.2-201ENST00000610260 441 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AL353748.2-201ENST00000622148 471 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 AP003485.1-201ENST00000625093 753 ntBASIC0.7□□□□□ -2.3
LINC01549A6NIU2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
LINC01549A6NIU2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 RPL23AP29-201ENST00000397284 453 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 OR51A3P-201ENST00000413596 924 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 FGF7P5-201ENST00000441829 291 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC096992.1-201ENST00000459808 709 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC087343.1-201ENST00000477341 475 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC099513.1-201ENST00000490423 301 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 MTND4P2-201ENST00000507767 1203 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 AC022254.1-201ENST00000567857 235 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 BNIP3P25-201ENST00000596023 559 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 DUSP12P1-201ENST00000612874 516 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 VN1R9P-201ENST00000614184 867 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LINC01549A6NIU2 OR4G11P-202ENST00000642116 1414 ntBASIC0.69□□□□□ -2.3
LINC01549A6NIU2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC005539.1-201ENST00000443768 1479 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 RPL21P90-201ENST00000415692 466 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 SNRPEP10-201ENST00000420249 274 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AL121882.1-201ENST00000422893 417 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AL691517.1-201ENST00000440833 1235 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 HMGB1P26-201ENST00000452520 628 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 SNORD13-201ENST00000459299 104 ntBASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.68□□□□□ -2.3
LINC01549A6NIU2 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms