Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MTND4P27-201ENST00000450813 1354 ntBASIC1.93□□□□□ -2.1
RBFOX3A6NFN3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RBFOX3A6NFN3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 SNORA18.3-201ENST00000384122 132 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RNU6-301P-201ENST00000384277 107 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RNU6-1207P-201ENST00000384343 107 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 SNORA51.11-201ENST00000384442 131 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RNU6-220P-201ENST00000390919 107 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RPL23AP29-201ENST00000397284 453 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AL590084.2-201ENST00000401481 382 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 MTND1P23-201ENST00000416931 372 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 MORF4L1P6-201ENST00000418771 268 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 HMGB1P9-201ENST00000429856 646 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 MICF-203ENST00000432679 129 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RPS29P26-201ENST00000477483 171 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RPS29P20-201ENST00000489592 171 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 GTF2IP9-201ENST00000502460 301 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC104072.1-201ENST00000568817 668 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC135628.1-201ENST00000568867 534 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AL357094.1-201ENST00000603845 844 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC093673.2-201ENST00000609674 331 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC009237.15-201ENST00000610252 501 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC013562.2-201ENST00000611632 603 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AL589743.7-201ENST00000612637 233 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 AC010133.1-201ENST00000615809 842 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 OR1S1-201ENST00000624470 978 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 CU459211.1-201ENST00000635667 749 ntBASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RBFOX3A6NFN3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 SNORA5B-201ENST00000363786 132 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 RNU4-51P-201ENST00000364206 140 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 SNORD114-30-201ENST00000364448 72 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 SNORA44-201ENST00000384584 132 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 MIR524-201ENST00000385242 87 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 RNU6-920P-201ENST00000410926 92 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 Z75741.2-201ENST00000417272 1167 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 USP9YP13-201ENST00000417797 480 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 BPY2DP-201ENST00000422208 265 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 PTP4A1P7-201ENST00000423476 514 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 ZYG11AP1-201ENST00000430329 837 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC098831.1-201ENST00000440661 216 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC025750.2-201ENST00000442609 450 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC092902.1-201ENST00000486999 259 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC090255.1-201ENST00000495779 349 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC080014.1-201ENST00000496877 1201 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC008427.1-201ENST00000503102 655 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AP000889.2-201ENST00000532684 490 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC005832.3-201ENST00000537929 631 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC106782.4-201ENST00000568264 210 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 MIR5694-201ENST00000581190 76 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AF131215.7-201ENST00000602443 707 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC021749.1-201ENST00000604322 607 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AL139344.1-201ENST00000605228 195 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC024060.1-201ENST00000607052 494 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 OR10AB1P-201ENST00000609613 938 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC019226.1-201ENST00000625666 515 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 AC011477.1-204ENST00000623416 1325 ntBASIC1.91□□□□□ -2.1
RBFOX3A6NFN3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
RBFOX3A6NFN3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms