Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 BX248409.1-201ENST00000455497 255 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 SNRPFP4-201ENST00000456366 242 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 Y_RNA.670-201ENST00000516255 105 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 DEFB108D-201ENST00000527787 222 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC090616.3-201ENST00000582184 217 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AP000254.1-201ENST00000609934 520 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC025594.3-201ENST00000613068 790 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 AC012150.2-201ENST00000621300 544 ntBASIC1.89□□□□□ -2.11
SCN10AQ9Y5Y9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 MTND4P23-201ENST00000447723 1363 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 SNORA51.6-201ENST00000384151 125 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AL445687.1-201ENST00000439946 251 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AL121871.1-201ENST00000443413 436 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 BX322784.1-201ENST00000455793 1077 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 RPS27P26-201ENST00000494583 239 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC090453.1-201ENST00000495560 436 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 MTCYBP17-201ENST00000503579 789 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC025768.1-201ENST00000510057 267 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC108078.2-201ENST00000510750 236 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 PRELID2P1-201ENST00000552837 301 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 HMGB1P14-201ENST00000557424 591 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC105224.1-201ENST00000587055 421 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 AC012443.1-201ENST00000605605 231 ntBASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SCN10AQ9Y5Y9 SNORD82-201ENST00000365530 70 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 BEND7P1-201ENST00000422058 457 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 MICF-203ENST00000432679 129 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC009127.3-201ENST00000570531 403 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 RPS15AP11-201ENST00000594193 385 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 BX322635.1-201ENST00000605804 496 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 UCA1.1-201ENST00000620952 75 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC090617.9-201ENST00000623751 147 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 Y_RNA.355-201ENST00000365462 98 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 Z98749.2-208ENST00000381646 500 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC018630.2-202ENST00000422992 927 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC079780.1-201ENST00000428259 207 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AL022578.1-201ENST00000439330 1433 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AMD1P1-201ENST00000457220 922 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 MTCO3P2-201ENST00000457365 171 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 RNU7-26P-201ENST00000458980 63 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 ACTR3BP3-201ENST00000565577 979 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AC013444.2-201ENST00000603317 787 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.87□□□□□ -2.11
SCN10AQ9Y5Y9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 SNORA27.3-201ENST00000364937 134 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 MIR525-201ENST00000384978 85 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 RNU4-72P-201ENST00000410754 173 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC092638.1-201ENST00000411966 1275 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 RPL17P12-201ENST00000413391 526 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 Z75741.2-201ENST00000417272 1167 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC078857.1-201ENST00000469870 667 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AL135752.1-201ENST00000479477 471 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 KLRA1P-201ENST00000503499 986 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC093767.1-201ENST00000504523 156 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 MRPS36P2-201ENST00000512569 299 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 ISCA1P3-201ENST00000577104 373 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC011260.1-201ENST00000578420 472 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AL590099.1-201ENST00000615276 138 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 AC009812.4-201ENST00000569134 1805 ntBASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
SCN10AQ9Y5Y9 FGF7P8-201ENST00000402994 292 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 RN7SKP101-201ENST00000411376 320 ntBASIC1.85□□□□□ -2.11
SCN10AQ9Y5Y9 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms